Twilight Prime

A crossover/fusion of Metroid and MLP.

Phantom Fan 21: Here a second game crossover for one of the Mane 6. Now unlike Twilight "Metal Gear Sparkle" Stories, this will not be in game order. This will be like Metroid Prime 3 only mix with the order Metroid games. Twilight won't met Samus but will get her weapons and upgrades. To her they will be spells. They are the Morph Ball, Bombs, Charge Beam, Ice Beam, Wave Beam, Plasma Beam, Varia Suit, Gravity Suit, (Which just make a orange and dark purple glow around her), Speed Booster, Missiles, Super Missiles, (Which will be two powerful blasts from Twilight horn, one red and the other green) Power Bombs, and the Screw Attack. I think I got the all the first weapons from the first Metroid game. I know the Speed Booster, Super Missiles and the Power Bombs are not in it so I went with the remake. Now also like Metroid Prime 3 Twilight get affected by Phazon and has control over it, however she learns it slowly takes over her. She call the Phazon in her Prime, because it use just like her magic. I even thought of the corrupted looks for Twilight when she goes in a over load. At 25% her eyes has a faint blue to them, At 50% Twilight fur coat becomes a blue-purple color showing the corrupted has been growing and At 75%, Twilight eyes are show to be fully blue and her fur coat grains a dark purple color much dark then her normal fur coat color. Feel free to draw them, due it I can't draw and put up pictures because I don't have a scanner.

Now that out of the way, I not going to use the same Space Pirates from the game, but I will use a new type of pony that come from space that want to destroy all of Equestria. They will be call Space Ponies Pirates. Now the first chapter will look rush but I say this now, The Space Ponies Pirates arrived and be attacking Equestria for weeks started with Canerlot since they, the Space Ponies Pirates, think it the powerful place on the plant. They fight as be going on for three weeks and ether side has grain or loss anything. Now Princess Celestia has a plan that will defeat the Space Ponies Pirates and make them leave, will it work? Also keep eye out on what Twilight will look like when she using the Phazon even when corrupted. Also two charters form the show will be use to be Kraid and Ridely, namely one will be a Changeling and the other will be a Dragon. I don't think there a creature that fit Kraid. So I using a Changeling. As for Ridely, will of course I'm going to use a dragon after all Ridely look like a dragon. Will let get on with the story. Here how Twilight get Phazon in her and met the Space Ponies Pirates and their leader.


'It been three weeks since these Space Ponies attack our home. We been fight back strongly but ether side has grain or lost ground. Now I been send to help my brother, Captain Shining Armor, to deal with the Space Ponies. Celestia believes that my smarts will help stop the Space Ponies attack. I just arrived at Canerlot and it steams empty without anypony around. Still I have to help any way I can. I just hope I can stop the Space Ponies before we lose Canerlot-Twilight Sparkle at 0230 hours'.

Twilight step in the castle and two guards greet her. "Hello Twilight Sparkle, Because of the of the new space invaders Celestia has a new security that all doors can only be open by a unicorn blast from it horn. We know you are already skill unicorn, try hitting all the targets around the door." The Guard said.

Twilight look around the door and saw four red targets. Her horn glow a purple glow and she fire at each target. Soon all four was turn green and the doors open.

"Well done, The Princess made the right choice as you to be her student." The guard said and Twilight walk thought the doors.

'Yes, I'm Princess Celestia Student. After entering a school in the castle I was given a test, to hatch a egg. I couldn't do it no matter what. Just as I was giving up hope, a loud sound, which I latter discover was the Sonic RainBoom, made my magic grow stronger and hatch the Egg. That when I met Spike. He still a baby Dragon but I love him very much and he like a little brother to me. Sadly after the test was done I lose control of my magic. I not sure what I did, but I did know that Celestia hoof appear on my shoulder and my Magic stop and undid the spells I did.- Twilight Sparkle.'

Twilight walk through the castle and so reach other guard.

"Ah, Twilight! Celestia wanted to remind you that high spells are not to be use unless we are attack but we know you are still learning, so I have a spell that might help. See those targets over there?" He said and pointed at them.

Twilight turn and saws them.

"This spell is really powerful but I think it best you know this incase you do need it." He said and an Red glow appear on her horn and fire at one of the targets. After that he breath hard before looking at her.

"This spell is call the Red Blast spell. It really powerful and only should use if need. With practice you can use it to help you." He said.

Twilight nods and the guard moves out of the way and Twilight step in the throne room where Princess Celestia along with the Griffon King, Dragon Lord, and a Diamond Dog leader stood with her. Each had a guest with them.

"Well, well, if it isn't Rainbow unicorn friend." Said a voice Twilight knew well.

"Gilda! That enough." The Griffon King said.

"You! Your that pony the friends with the whining unicorn." Said the smaller Diamond Dog.

"I'm greatly sorry for what my soldiers did to your kind Celestia." The Leader said.

"It fine, Twilight. It time to talk about a plan." Celestia said before turning to Twilight.

"Yes Princess." Twilight said and walk next to her.

"Now that everypony is here, it time to start. As you all know we have been attack by Space Ponies." Celestia said.

"Yes, they are powerful but doesn't steams to gain anything from the fight you been having." Gilda spoke up.

"Gilda! That maybe true but what to stop them from coming to our homes as well?" The Griffon King said.

"True! We may not like each other that much, but we share a common emery. We have to work together to save our land." The Dragon Lord agree.

"By the way Miss Twilight.", A dragon said turn to her, "How do you know the Princess?"

"I'm her Student." Twilight answer.

"What?! That not possible!" Gilda shouted.

"It true, but we are getting off track.", Celestia said, "The Space Ponies had try to storm the castle, but fail and retreated."

"We now know that they hide in the fields wanting for their next move to plan out." Dragon Lord spoke up.

"The only way we can stop them if we send some kind of team that will stop them while they are unready." The Leader said.

"I don't think that will work, but I do have a plan." Celestia said.

Twilight turn to Celestia, she already knew she had to help her brother in the battlefields and waited until she heard the Princess's plan.

"We will send our best fighters to my army to help the fight, if the Space Ponies see that races are working together they might get scare and flee, hopefully." She said.

"Well Gilda, you better put up a good fight and be nice to the others." Griffon King said looking at her.

"Yes Sir." Gilda said growling.

"Smoke, are you ready for the field of battle?" Dragon Lord ask the smaller black dragon.

"You got Sir! They won't know what hit them." Smoke said blowing smoke from his nose.

"Digger! I better see good results in your fight or you will go back to digging." The Leader said.

"Just let me at them! These teeth and craw will tear them apart!" Digger said baring his teeth and craws.

"What about you, Twilight?" Smoke ask.

"I'm been send to help my brother." Twilight said.

"Really? Wow! Your brother out on the battlefield? I would like to met him." Smoke said surprise.

Then the castle shook and the guard came running in with Luna in front of them.

"Sister! The Space Ponies are attack the castle!" She said.

"What?", Celestia said surprise, "We must fight back, all four of you do what you can to save the castle."

The four fighters (though Twilight dislike fighting) ran out and saw the Space Ponies attack the guards. Twilight was quick to spot one head for them and send a magic blast that knock it away.

"We better spit up. If we can take them down then we have a chance to save this castle." Smoke said.

"Right! Let's give them a good fight." Digger said.

"Twilight, I know you not much of a fighter, but I know you can do anything to save the castle." Smoke said and the group ran off.

Twilight turn back to the Princess and she nods. Twilight runs in to the fight unknowing her life will charge forever.


Twilight ran though a hall using her magic to knock all Space Ponies away from her. She duck under one Space Pony and use a spin kick to knock it out.

'I not really a fighter, but my friend Rarity has teach me some hoof to hoof combat the will come in handy for times like these. Still this Space Ponies are strange. They just attack us as if they were waited for us to be here. Ether way they have to be stop. There only one thing I know they will try to good for. I just hope they didn't getting there yet.-Twilight.'

Twilight ran thought castle and was jump by one of the Space Ponies. Before it could attack Twilight smoke cover the area and a sound of swift movement was heard. The Space Pony felt pain over it body as someone or thing attack it.

Finally the smoke clear and there stood Smoke standing over the Space Pony.

"They maybe sneaky but I'm sneaker." He said before turning to Twilight.

"They steam to be heading towards the lower part of the castle. I was just on my way to tell the others when I saw you. Thought I give you a heads up and now you own me one." Smoke said.

"Thanks, I met you and the others there. I know my way around this place." Twilight said and Smoke nods and fly's off.

Twilight then head back down the hall taking out more Space Ponies. Unknowing two reptile like eyes was watching her.


Twilight runs until she a guard throw toward her. She caught him with her magic and set him down.

"Be careful, that thing is stronger then it looks and has some strange magic." He said before fainting.

Twilight look and saw a giant Space Pony walking on it back hooves and roar as it near Twilight.

Twilight ready her horn and the Giant Space Pony charge at her. Twilight jump away and fire a spell at it, but the armor it had was tougher then the ones she fought before.

Twilight jump out of the way of it giant hoof and continue to as it try to stomp here again and again. Finally they back out to a large balcony and Twilight saw she was going to have to fight it.

"I maybe not like to fight, but something tells me you not going down without one." She said and a red glow appear on her horn.

The creature reason with glowing spots of it own. Twilight aim at one of them and fire. The Red Blast did the trick, the glow spot blew up and the creature roar in pain. Twilight build up another Red Blast and fire at the second spot. It too blew up and Twilight could see it weak spot on it head.

The creature roar and charge at Twilight, who jumps out of the way and then runs up to it back and jumps on. The Creature try to shake Twilight off, but she had a good grip on the shoulder plates of the armor. She lift her head over the weak stop and said, "Don't mess with our Kind! You never know what could happen!" and fire a Red Blast at point blank range.

The Creature roar as Twilight jumps off it back and lands on all four hooves. The Creature try's to stay on it hooves back too close to the edge and fell over into miss and disappear. Twilight look over the balcony to see no signs of it.

'I had no clue on what it was but I need to get to the city. The Princesses have a secret bunker there. In there is the Elements of Harmony. I just hope the Space Ponies didn't get there first.-Twilight'


Twilight met up with the others as she step out of castle.

"What took ya? We were going to leave you behind." Gilda said.

"They are after something. I can tell." Digger said.

"Hey relax guys, we stop them right Twilight?" Smoke said then ask Twilight.

"I hope so. I know what the are after and I hope we are not too late." Twilight said.

Twilight lean them thought the city and to the bunker. Twilight started to use her magic to open the door when something come zooming from the sky.

"Heads up! Something coming!" Gilda said and they all get ready to fight.

A creature land and fire a blue beam at Digger who charge at it and was knock back. Gilda was able to get close and threw a few attacks, but it dodge them all. Then punch her away. Smoke threw some fire balls at it hoping long range will work better then short. But the Creature put up an blue shield to block the attack and send a blast back at him. Then turn to Twilight and fire another shot. Twilight move her head to the side and the attack miss. Then she fire her own shots back at it. Twilight was able to score a few hits and knock the creature back. The other stood up and ready themselves to attack. Then the creature stood and started to glow blue around it body. Then release a powerful beam that knock all of them off there feet.

The Creature walk over the falling fighters and stop at Twilight. It lift her with a blue glow. Twilight open her eyes to see the creature was a mix of her and a Changeling. It lean to her ear and spoke in a voice that was a mix of her and Chrysalis, "Thank you for freeing me." And drop Twilight. Twilight watch as it walk away, not even taking the Elements of Harmony. It flew away as Twilight black out.


Back at the Castle, Princess Celestia and the leaders of the land watch as the Space Ponies retreated like their leader was defeat.

"They retreat, that odd." The Dragon Lord said.

"Yes, that is odd. I just hope they didn't get what they were after." Celestia agree.

Then a guard come running in.

"Princess! Good News and Bad News. Good news is the Space Ponies are retreat as you can see." he said.

"Did they find them?" Celestia ask.

"No the Elements are still in the bunker." He said.

"That good." The Diamond Dog Packer Leader said.

"The Bad news is we fond Twilight and the other knock out as if some pony blast them in one shot. They are being brought to the hospital as we speak." he said.

"They must have fought the leader and might have been to powerful for them." The Griffin King said.

"We will take our own fighters back to our lands." The Dragon Lord said.

"Yes, but remember they may return. For now, I must see my student." Celestia said and walk away.


I know, it not like the start of Metroid Prime 3, but I what to get this done. Up next Twilight learns about Phazon and the powers she gets. The Phazon will give her the Morph Ball, Bombs, and Charge Beam. Morph Ball as you can guess turns Twilight into a ball that fit in tight places. Bombs are just small energy spells that Twilight lay around. And the Charge Beam act just like the games. Send me some tips on who be the first boss. And Riley is being save for later for he out. There is a Dragon playing him but it not the two Dragons you read here. Please review.