Chapter 1: Disappearances & Reappearances

Red lights flashed along the empty hallway, the only sound was that of a set of running feet. The girl's hair flew wildly behind her as she raced toward the last door on the left. Throwing the door open, she glanced at the boy in front of the computer.

"Where are they," she asked, brushing her hair from her face and attempting to catch her breath.

"They're not in any of the other regions, I can tell you that," the boy said, turning from the screen to face his friend.

"What do you mean?"

"I mean," the boy said, fixing his hat, "the legendary Pokémon aren't in any of the regions. They've gone to a different dimension."

"You've gotta be fuc-"

"No I'm not. They aren't anywhere to be found."

The girl paused and looked at the boy in front of her. The boy noticed a look of hopelessness in his friend's grey eyes before she decided to speak again.

"Then what do we do?"

The boy smirked, "what else? We call the others and then follow the legendary Pokémon."

Meanwhile – in Konoha

It was a generally calm evening for the Village Hidden in the Leaves. Many shinobi were either relaxing in their homes or wandering through the streets. Our favorite shinobi were in their respective houses. Everything was calm until a loud crash shook the entire village.

Looking out their windows, people across the village attempted to figure out the cause of the explosion. Before their very eyes, a massive black and red bird appeared out of the smoke near the gates. Civilians began to panic while experienced shinobi prepared to defend the village.

Within the Hokage tower, Tsunade shouted for Shizune to send out as many shinobi as they could to call for an evacuation of the civilians as well as those shinobi that could not fight.

As shinobi moved in on the bird-like creature, they noticed another creature. This one resembled a large, blue stag, which caused the shinobi from the Nara clan to take a second glance at the new creature.

Some of the first shinobi that reached the creatures started to attack, the voice of a girl echoed through the surrounding area. "Sekhmet, don't let them hurt Yveltal or Xerneas!"

A white, dog-like creature with a black crescent appearing through the fur on its head jumped between the shinobi and the two larger creatures, a fierce look plastered on its face.

"Sekhmet, use dark pulse on Yveltal!"

The white furred creature turned to face the bird before jumping into the air and releasing a wave of dark colored energy toward the bird. Dodging the attack, the bird, now known to the shinobi as Yveltal, charged toward the much smaller creature.

"Greninja, use smokescreen," a male voice shouted. By this time, the shinobi had stopped their attack, unsure of how to proceed in the current situation.

A blue frog flew toward the Yveltal before releasing a cloud of smoke at the much larger creature, giving the two smaller ones an opportunity to move out of Yveltal's way. The stag's eyes grew wide before it started to back away into the forest.

"Shit," the girl swore under her breath, "Sekhmet, use sucker punch!"

But it was too late. The stag had already disappeared into the forest. Swearing again, the girl turned to her partner, "Xerneas got away!"

"Then we'll have to find Xerneas later! Focus on Yveltal!"

Nodding, the girl turned to the white, dog-like creature by her side, "use bite, Sekhmet!"

Leaping toward the bird with jaws open, Yveltal knocked the smaller creature away and into a tree before turning toward the sky to retreat. The girl gasped, rushing over to the creature to check her wounds. This time, the boy swore and turned to the blue frog by his side. "Greninja, hit him with water shuriken!"

However, just like Xerneas, Yveltal had disappeared into the night sky. "He's gone," the boy called out to the girl. The girl petted her furred creature before taking out a black and yellow ball. Hitting the button in the center, the ball opened and turned the creature into light before it disappeared into the ball. The boy did the same thing to his frog as the girl walked over to join him.

"What do we do now," she asked, placing the now smaller ball into her bag.

The boy rubbed his face before pinching the bridge of his nose. "I have no idea. I guess we'll have to track them before someone else does."

"I'm sorry, but you'll have to come with us for questioning."

The duo turned to find a white haired man standing in front of them. Looking him up and down, the girl put a hand on her hip. "I don't think so, bud."

"I'm sorry, but with such powerful creatures at your disposal, you are a risk to the village until we have our questions answered. Now, if you could come with us, then we can release you quicker."

Other shinobi started to take a step closer in case the two tried to run.

"We aren't going with you," the boy said, "we have more important things to do."

"Then I guess we have to choice," the white haired man said. Hands reached for the bags that the two had and, despite their efforts, the shinobi confiscated the bags and grabbed hold of the potential threats, teleporting the two away for their interrogations.

This is just something that came to mind as I was working on my Pokémon/Harry Potter crossover. If you would like me to continue this story, please leave a comment! Thank you for reading! :)

So that there's no confusion, Sekhmet is an Absol.