Chuck vs the new and improved

by Overpowered OC's123

What happens after the end of season 5? what happens when there is yet another intersect besides Morgan, and Chuck gets his back? What happens when he sees Hannah who turns out to be a spy? What happens when Shaw is forced back into the group? And what happens when Chuck, Morgan and Shaw, along with the gang have to track down the new intersect who can beat all three of them. AU

1. Chapter 1:Blackmail's such and ugly word

Chuck Vs. the New and Improved

A/N: Hey guys this is my first ever fanfiction so please leave some feedback about how I am doing and progressing. Cheers

Disclaimer: I do not own Chuck or anyone from the Chuckverse aside from my own OC, this story takes place after season 5

Chapter 1: Blackmail is such an ugly word

Chuck was down in castle with Casey, Sarah and Morgan, who was still learning to deal with the intersect despite having the fault fixed; they had just received a message form an anonymous contact about an extremely important mission along with a package they weren't allowed to open. But right now Chuck couldn't focus on that. Whilst they all waited for the transmission of their next employer to be put through, being Chuck kept stealing glances at Sarah, who's eyes were transfixed on the screen, she knew he was watching her. She could always tell. And yet being the professional spy Sarah was she wanted nothing more than to stare at Chuck and try to remember.

Her mind wandered back to that day at the beach when he'd kissed her to try and allow her memories to come forward. Yet when they pulled apart…nothing. Not one memory came forward for her comfort. Since that day she stayed with him anyway and quickly adapted to the life of Carmichael industries and slowly but surely her and Chuck had started to rebuild their relationship.

As the two attempted to sneak glances at each other it didn't go unnoticed by Morgan and Casey. Both had built up their senses to know exactly when to expect them to, as Casey puts it, "gaze into each other's eyes". Both of the agents had noticed what had happened to their behaviour towards one another. In a different way, Morgan and Casey had also built up their relationship. As Morgan was the Intersect, it was up to Casey to train him. Again. In which Casey had very loudly and physically protested to. He still proceeded to train Morgan, who unbelievably exceeded very quickly.

As Chuck and Sarah continued to avoid being caught gazing at each other, the screen blared to life with the grudgingly tolerant face of General Beckman. As she did all those years ago she began with her regular greeting. After a few brief moments of shock Chuck commented "General it sure has been a while".

"Yes Chuck it has"

"Surely you know we no longer work for the CIA". Chuck added with a certain amount of cockiness.

"Yes, we do realise this, however we need your help Chuck. I'm going to be blunt. However I'm not asking, I'm telling. I wasn't in favour of this but if you do not accept this mission, Carmichael industries will be shut down."

After hearing this Chuck's face varied from shock to confusion to anger before exclaiming "WHAT! They… they can't… you can't do that"

After a solemn expression the General replied "We can and we will if you do not accept this mission"

"Fine what do you want us to do?"