the events of Star trek (2009) and Start trek into darkness has happened in this story the only difference being Jim and Bones were married.
in this story Bones and his ex-wife have a daughter together.
if there's any tags I didn't add that you think I should please let me know.

When James T Kirk and Leonard McCoy joined the enterprise they had already been married for three years and had been together for 6 years.

Before the accadamy Bones was married to Jocelyn and they had a daughter together called Joanne. But there marriage had fallen apart before she had turned one.

He met Jim two years later and the two of them quickly started dating before they decided to join the accadamy together.

So but the time Jim became captain of the Enterprise there were in a happy stable relationship.

Only some of the crew know that their captain and head doctor were married.

Not because Jim and Bones felt the need to hide there relationship but because the two of them barley showed any kind of PDA around the ship.

When Jim died after everything happened with Kahn and brought back the two of them thought there chances of ever having kids disappear because Jim no longer had the ability to have kids.

So here were are three years later with Jim and Bones still together but everything wasn't quit as happy as it used to be.

Jim was seat in his captain chair thinking back to the previous night with a smile on his face.

The night before had been one of the rare few between Jim and Bones that hadn't ended up with the two of fighting.

"captain." Spock said breaking Jim out of his thoughts.

"yes Mr Spock?" Jim asked looking over at his first officer.

"are you okay you've been quite for a lot longer then usual?" Spock asked his captain.

"yeah I'm fine Spock." Jim said as he stood up before a wave of dizziness hit him and he had to hold on the arm of his captains chair.

"you sure your okay?" Spock asked worried for his freind.

"yeah I'm fine." Jim said as the dizziness went away. "just got up to fast." Jim added as he walked over to one of the screens. But before he could get there the dizziness came back and he passed out.

"Jim." Uhura said worriedly as she ran over to one of her closest friends. "Spock get McCoy." she shouted over to her boyfriend.

Spock just nodded before walking over to the captains chair and turning the coms on and patching himself through to Dr McCoy.

"what do you want Spock." Was the first thing Bones said.

"we need you Dr. The captain has passed out." Bones was standing up and heading to the bridge the second Spock had mentioned his husband.

Jim rushed onto the bridge and over to his husband as quickly as he could.

"what the hell happened?" Bones asked as he checked for a pulse.

"he just passed out." Uhura told Bones walking over to them.

"help me get him to med bay." Bones said to no one in particular as he tried to lift Jim up.

Uhura and Spock walked ahead of Bones who was carrying Jim bridal style down to Med Bay.

Spock and Uhura stood back a bit as Bones layed Jim down on one of the medical beds and called for the help of some of his nurses.

The next 45 minutes were spent with Bones and his nurses working on Jim.

"what happened?" Uhura asked once Bones had finished.

"he was dehidrated." Bones said looking relived. "he should be awake soon."

"can you let use know when ha wakes up?" Uhura asked Bones knowing that she needed to get back to the bridge.

"yeah. I'll let you know when he's up and you can see him." Bones said before Uhura nodded and walked away.

Bones stood there watching the soot were Uhura had been standing for a couple minutes before turning around and walking back into med Bay and over to Jim's bed.

"Bones." Jim said about half an hour later as he woke up.

"Jim. How you feeling?" Bones asked going into doctor mod, checking Jim's vitals.

"tired and my head hurts." Jim said trying to seat up.

"don't." Bones said placing his hand on Jim's chest to stop him from sitting up. "you need to rest."

"what happened?" Jim asked as he gave up trying to sit up.

"you passed out on the bridge." Bones sais sitting back down next to his husband. "you haven't been eating and drinking enough."

"I haven't been able to keep anything down for about a week." Jim said as Bones grabbed his hand.

"why didn't you tell me?"

"we haven't been talking much lately and I didn't want you to worry."

"well I know why your so sick." Bones said after a few minutes.

"what?"

"we took a blood sample and it revealed your pregnant." Bones revealed as he squeezed Jim's hand tighter.

"no that's not possible. When you brought me back after Kahn you said I could no longer have kids." Jim said sounding panicked.

"I said it would be very unlikely for you to get pregnant." Bones corrected his husband.

Jim just nodded as he seat there worrying about everything that could go wrong.

While Bones seat there looking at his husband just relived that Jim was okay.

The two of them had no idea want they were going to do.

How they could raise a child on a starship.

How Jim could be pregnant and captain.

How Joanne would react to the news.

And what Starfleet would react to the news that there captain on their first five year mission was pregnant.

I hope you enjoyed the first chapter.
I will try and post a chapter every week.
if there's any mistakes just let me know in the comments and i will try and fix them.
I would love to know what you thought of the story, knowing that people are enjoying my writing really helps me keep writing.