So, you're all probably going to hate me but I've decided to divide my story 'Mother of Dragons' in two parts. In fact, I turned 'Mother of Dragons' into a prequel for this story here, 'The Dragon Queen'. That is because I'm impatient to get to the good stuff (and Jonerys). This story will start in season5 but since some events differ from canon, these first few chapters (three) will work as a big summary for what was supposed to happen in 'Mother of Dragons'. Though I will continue that story, I prefer to concentrate on this one, at least for now. If you'd prefer to wait for the prequel first, then this story is not for you, however, just to warn you, it may take a long time for me to write it.

I advise you to read this because, while a lot of events are the same as canon, some are different. (BTW, some parts are taken directly from 'A Wiki of Ice and Fire' and 'Game of Thrones Wiki').

My Harry/Daenerys will not look like Emilia Clarke by the way. I love Emilia as Daenerys but, to differentiate her from the actual Daenerys from Canon GOT, but, I've decided to have my Daenerys with another face. I imagine Dany as having Ginta Lapina's face (but with violet eyes) but with a body similar to Sophie Mudd (very curvy in the chest department but also slender and with a slim waitst (almost a wasp waist)) but with a rounder butt and taller than Sophe Mudd (but shorter than Ginta Lapina - 168 cm instead of 175 cm) and also slim but toned legs like Sophie Mudd but longer obviously (because she's taller) - slender hourglass figure basically but with (maybe a little exaggerated) curves. She can basically compete with Arianne Martell in the chest department - though Arianne doesn't exist in this story - but she's slimmer than Arianne. (Don't judge, Daenerys is supposed to be the most beautiful woman in the world therefore no one can compete with her in terms of beauty not only because of her face but also because of her body).

BTW, if you're not a fan of Daenerys or Jonerys, don't even bother reading this story. Any negative comment about Jonerys and Daenerys as a character (or Jon for that matter) will be ignored, or erased if it's a guest review. Don't lose your time and mine.

This story will ignore season8 almost completely because it's a joke.

-Prologue:

Harry Potter sacrifices herself to kill Voldemort. She wakes up in a limbo that looks a lot like King's Cross and meets Regulus Black. Regulus tells her that she was supposed to be the last horcrux destroyed but since Nagini was still alive when Harry died, that will force both her and Voldemort to remain stuck in limbo for eternity, unable to move on. (Their souls are so intertwined that what happens to one, happens to the other).

However, there is a way to solve the situation. Harry became the Master of Death by reuniting the Deathly Hallows, even for a short time. For this reason, she will be given a second chance at life. She can't return to her body and her old life but she will be given a new life, in a new world. That will severe the connection between her and Voldemort and will allow Death to claim Voldemort's soul in full like He was supposed that Halloween night in the year 1981.

To sweeten the deal, Regulus says that Death will also allow Harry to bring someone with her, her godfather Sirius Black. Since Sirius didn't die in a normal way but by being thrown through the Veil, his soul got stuck in it and he's also trapped in a limbo. This will grant him freedom.

Harry, of course, accepts. Regulus leaves her with a warning before she's sent to be reborn. What is written on her parents' tombstone: 'The last enemy to be defeated is death', will become literal. Harry doesn't understand what it means.

-Interlude:

Harry is reborn as Daenerys Targaryen, a princess of a land called Westeros. A rebellion breaks out and her entire family dies: her father, King Aerys, is killed by one of his Kingsguards, her mother Rhaella dies after giving birth to her, her brother Rhaegar, the heir to the Throne, dies in battle, her niece and nephew – Rhaegar's children – and his wife Elia, are killed as well. Her brother Viserys drowns while they are escaping by ship towards Essos – a storm breaks out. (You know the story, except for Viserys and anyway, the Interlude explains it.)

She's the only one left except for her uncle Sirys – who once was Sirius Black – brother of her parents and a sworn Kingsguard. A queen without a crown, a throne, a land to rule, or even a place to call home.

They stay in Braavos for a while, until the Usurper's assassins find them. Ser Willem Darry and the other men loyal to her except for Sirys are killed. They are forced to fled. Daenerys is 5.

After that, they move from one city to the next, never safe, always looking over their shoulders. Sometimes things are so bad that they have to resort to begging and living on the streets. Some rich merchants and nobles help them because of her name but they always have ulterior motives. Sirys offers his sword for nobles and merchants sometimes to get enough money to take care of her.

Daenerys' education is not a formal one but Sirys makes sure she learns everything she needs anyway. Everything about Westeros, its costumes, history, Houses, myths and legends. But also mathematics, economics, war strategy. She learns different languages – High Valyrian, Bastard Valyrian, Dothraki, Ghiscari. And she learns how to fight.

Sirys teaches her himself but he also finds others willing to teach her. Her favourite weapons are double short swords – similar to the one the Unsullied have – one for each hand, though she's perfectly able of wielding a longsword, Westerosi knights' weapon of choice. She's also very good with a bow, smaller than the one the Westerosi soldiers used, and she can use it in the Dothraki way – horseback archery –.

She's also handy with a dagger and with hand to hand combat.

Sirys is trying to teach her all that she needs to be both a queen and a commander.

Daenerys feels like getting the Iron Throne back is her duty, to redeem her family's name. She doesn't want her House to be remembered for the actions of her mad father or reckless brother. She doesn't want House Targaryen to fade into obscurity and with its last members alive forced in exile while a usurper sits on the throne her family had created, ruling a city her family built and a country her family united into one.

-With the Dothraki:

It's the year 295 AC. Daenerys and Sirys are staying in Pentos, in Illyrio Mopatis' mansion. Daenerys is 13, Sirys 33. (Canon events with the death of Jon Arryn and Robert Baratheon asking Ned Stark to be Hand of the King starts in the year 298 AC). – Also, Sirys remembers his old life and knows who Daenerys used to be –.

Daenerys has a dream, of big, scaly wings of different colours and fire and blood. Then the dream changes into cold winds and snow storms and blue eyes, and beings wearing ice armors. The dream ends with a black dragon bathing her in flames. She wakes up feeling strong and fierce.

She takes a bath then, the water boiling hot but pleasantly warm for her.

Daenerys knows she and Sirys need an army, both because there's no getting back to Westeros without one and because having an army means power and protection against Robert Baratheon's assassins.

They can't pay for a sellswords' company. Illyrio could but that would mean becoming even more indebted to him. And anyway, sellswords are not trustworthy, they fight for gold, not loyalty.

Their options are limited. Illyrio proposes a marriage to Khal Drogo, a Dothraki Khal with 40'000 men who has never been defeated in battle. Khal Drogo has seen her during one of his visits to Pentos and he wants her as his khaleesi. (Daenerys, even as young as thirteen, has the body of a woman grown – she's slender but with a very generous bosom, slim waist, round bottom and long, slender but toned legs. She's beautiful and ethereal – the typical otherworldly beauty of the Valyrians – with gold-silver hair and violet eyes)

Illyrio also warns that Khal Drogo is not one to be refused and that, even if Daenerys says no, he would probably take her anyway and burn Pentos in retaliation.

Daenerys hates listening to Illyrio's suggestion, hates being guilt-tripped into a marriage, but she doesn't see what other choice does she have. Marrying a Khal would also mean gaining power for herself as long she played her cards right, as long as she could get her husband to fall in love with her and get him to do what she wanted. It was a risky gamble but worth it if it paid off. Love could be a powerful weapon, she knew this more than anyone. Too bad she doesn't know anything about seduction.

Illyrio gifts her three slaves, that he calls handmaidens. Irri, Jhiqui and Doreah. Irri and Jhiqui are Dothraki but Dorea was a pleasure slave from Lys. Daenerys asks Doreah to teach her all she needs to know about pleasing the Khal. (The lessons in sexual education continue during the whole marriage to the Khal and Daenerys becomes as accomplished as a bed slave in the art of lovemaking).

There's the wedding to Khal Drogo. Illyrio gifts her three dragon eggs that turned to stone. They're warm to the touch, at least for her. A man shows up, a man from the North of Westeros, called Jorah Mormont, who wants to serve her. Daenerys is not sure she can trust him but she's not in the position to turn possible allies away, especially those that came from her home country.

During the wedding night, Khal Drogo tries to possess her, to take her from behind like a horse. But she fights him and manages to convince him to try it her way, by looking each other in the eyes (Doreah's first teaching was: 'Love comes in at the eyes.'). She's the one on top, the one who rides him. Drogo seems to like it a lot and he looks at her with a fascinated and intrigued look.

Their relationship grows in time and though Daenerys can't really say she's in love with him, she learns to care for him. Still, she can't seem to convince him to cross the narrow sea for her, not yet.

Daenerys soon gets used to life in the Khalasar and gains the respect of many – not because she's a khaleesi but because she can fight, she proved her strength –, though there are always those incapable of it just because she's a woman.

At one point, while in the Dothraki sea, they encounter another khalasar, led by Khal Ogo, 20'000 strong. The odds are not in Khal Ogo's favour but a fight ensues between the two khalasars anyway. Daenerys asks Drogo to be the one to kill the khal for him. Drogo, who seems incapable of refusing her almost anything at this point, accepts. After a strenuous fight, Daenerys wins. She also gains her first scar, a long, horizontal line just above her elbow, almost like a bracelet, on her right arm. Daenerys has killed a man before, more than once, as Harry Potter, but it's the first time in this life. It's also the first time that she's not sure if the person she has just killed deserves it or not. She knows Khal Ogo is not innocent, but neither is her husband.

The surviving Dothraki from Khal Ogo's khalasar, about 8'000, named her their khaleesi. It's the first time Daenerys has men of her own who follows her, instead of just men who considers her their khaleesi because she's married to their khal. She has her own khalasar inside her husband's khalasar, though since it's still inside Khal Drogo's khalasar, it becomes a khas with Daenerys as their ko.

A little while later she finds out that she's pregnant. The strange dreams, of what she soon recognizes as dragons and of the ice armored men, continue. She always goes to touch the dragon eggs after each dream, feeling their warmth. She often keeps them over a brazier, hoping their fire would make them hatch like what had happened with Norberta, but nothing happens. One of her handmaidens catches her picking an egg from the fire with her bare hands and immediately snatches the egg away from her, to keep her from burning herself. Daenerys' hands are untouched though, while in Irri's palms there's the imprint of the eggs.

In Vaes Dothrak, Daenerys goes through the whole 'eating a horse's heart raw' ritual and her son is prophesized to be the 'Stallion who mounts the World'.

There's an attempt at Daenerys' life. Someone tries to poison her. Ser Jorah saves her life. Drogo, enraged, swears that they will cross the narrow sea and take the Iron Throne.

Once they leave Vaes Dothrak, Drogo's men attack Lazareen (her men follow her orders and don't attack). Drogo wants to sell the slaves to buy ships. Daenerys doesn't approve but she can't convince him to stop – Drogo says that this is their way. Daenerys tries to stop the raping by claiming as many women as she can for herself. One of Drogo's bloodriders goes to Drogo to complain about it. Daenerys refuses to give them back. Drogo is pleased by her fierceness. A fight ensues when the bloodrider says that Drogo became weak, taking orders from a woman. Drogo kills the bloodrider that had challenged him but he gets a wound to the chest.

The wound is not treated properly and gets infected. Drogo falls from his horse. A lot of the Dothraki leave, though those among Drogo's men most loyal to Daenerys and her own men remain. Jhaqo and Pono, two of Drogo's kos, declare themselves Khals and took 20'000 and 10'000 men respectively.

The khalasar is left about 10'000 warriors strong plus the slaves. One of Drogo's bloodriders – Haggo – refuses to take orders from her so she challenges him and beats him. He cuts his braid but stays loyal to her after that.

Daenerys asks Mirri Maz Duur, one of the women she had saved in Lazareen, to cure Drogo. Both Sirys and Jorah warns her it was too dangerous, that such magic always comes with a price, but she doesn't listen. Though she's not in love with him, she cares deeply for him and doesn't want to lose him. And he's still the father of the child she's expecting.

The woman betrays her, the payment for Drogo's life being her son's. She miscarries. Drogo is left in a catatonic state. Daenerys smothers him with a pillow to end his suffering. Mirri Maz Duur says the prophecy 'when the sun rises in the west' etc. Daenerys thinks the witch cursed her so she will never able to have children.

Daenerys chooses three bloodriders: Jhogo, Aggo and Rakharo. She gives Jhogo the silver-handled whip she received as a gift for her wedding, she gives Aggo the dragonbone bow she received as a gift for her wedding and she gives Rakharo the great curving arakh she received as a gift for her wedding.

She frees the slaves, and while some decide to leave, most stay with her. Then she prepares the funeral fire, putting Drogo's body and three dragon eggs there and tying Mirri Maz Duur to it. She finally figures out what her dreams have been trying to tell her, at least the ones about the dragons. Only death can pay for life.

She walks into the funeral pyre, ignoring both Sirys and Jorah's protests.

All night the fire burns. The khalasar waits around the fire.

At dawn, the fire stops burning and all is left are ashes. Sirys and Jorah come near the pyre, hoping beyond hope to find her still alive when they see her. Naked, but unharmed, sitting with bent knees. And there, perched on her chest and shoulders, there are three baby dragons.

The entire khalasar kneel to her.

-In Qarth:

It's the year 296 AC. Daenerys is 14 name days.

Daenerys names her three dragons Drogon, Rhaegal and Viserion, after her husband and her two brothers. She decides to follow the red comet that had appeared in the sky when her dragons were born. The Dothraki are convinced it's a bad omen, but Daenerys believes, since it appeared when her dragons were born, it's pointing in the direction in which she must travel. She leads her people east, through the red waste. She tries to feed the dragons raw meat but they refuse it. She considers the dragons her children.

They finally arrive in an abandoned city that Daenerys names Vaes Tolorro (City of Bones). While her khalasar recovers through the terrible journey in the desert, Daenerys sends her bloodriders to scout in every direction. Aggo and Rakharo return without good news so Daenerys starts to fortify the city against enemies. When Jhogo returns, three people are with her, citizens from the city of Qarth: the merchant Xaro Xhoan Daxos, the warlock Pyat Pree, and the shadow-binder Quaithe of Asshai. Daenerys gets invited to Qarth, though her khalasar needs to stay outside the walls except for her bloodriders, a few other Dothraki guards (plus Jorah and Sirys) and her handmaidens. Daenerys doesn't like it but she accepts, not seeing what other choice does she have. Her khalasar will receive food and water and everything they want as long as they stay outside.

Xaro Xhoan Daxos hosted her and her people in his palace. He's the richest person in Qarth.

In Xaro's lavish home, Daenerys teaches her dragons how to cook and eat their own meat and to breath fire on command. She keeps having dreams about the ice armored beings. And also new dreams, of a beautiful but desolate city whose buildings were made of a strange black stone, with topless towers and sphynxes as decorations and whose streets were flowing with lava. She had read enough about it in her books to know that she was dreaming of Valyria.

Xaro proposes marriage to her. Jorah warns her that, according to Qarth tradition, Xaro would be within his rights to ask for her dragons and she would be unable to refuse him. He urges her to take another path, harder maybe, but the right one. Jorah reveals his feelings for her and his belief that the people will both fear and love her, that he has never believed he would meet someone so worthy of ruling.

Daenerys doesn't acknowledge Jorah's feelings but she agrees that Jorah is right about Xaro. She asks Doreah to use her skills as a lover to find out more about Xaro. Doreah happily agrees.

Xaro Xhoan Daxos holds a reception in honour of Daenerys. Daenerys meets again Quaithe of Asshai and the warlock Pyat Pree. He demonstrates his magic by replicating himself and invites her to visit his order at the House of the Undying.

Quaithe talks to her, pronouncing what sounds like a prophecy: 'To go north, you must journey south, to reach the west you must go east. To go forward you must go back and to touch the light you must pass beneath the shadow.'

Daenerys also meets Archmaester Marwyn, one of the few maesters who gained a link of Valyrian steel in his chain. Daenerys recognizes the name as one of the people who taught Mirri Maz Duur magic. Daenerys is not particularly happy to meet him at first but Marwyn apologizes to her, telling her that, if he had known how she would have used what he taught her, he would have never taught her in the first place. Marwyn said that he left the Citadel once again to spend the few years he had left traveling the world and unravel his mysteries because he couldn't bear to stay in Westeros just to see Robert Baratheon destroy the realm. He offers to serve her as her Maester if she would accept. Daenerys accepts.

Jorah once again urges her not to trust Xaro. Sirys agrees with him.

Xaro suggests that Ser Jorah has feelings for her. Daenerys knows this but says that even if it were true, doesn't mean Jorah is wrong. Xaro shows Daenerys the Valyrian stone vault that guards his fortune and offers to fund her return to Westeros in exchange for her hand in marriage (second time he asks for her hand). Daenerys does not refuse him outright but Xaro understands the rejection all the same.

Daenerys visits the Pureborn of Qarth, hoping to convince them to help her in her conquest of the Seven Kingdoms. They refuse, however.

Jorah and Sirys continue in the search for ships (bringing her bloodriders with her), so they would at least be able to leave the city but Daenerys returns to the palace.

When she returns Xaro invites her to dinner in his private solar. Daenerys accepts, not wanting to displease him further. Xaro offers her spicy wine and delicious food but soon Daenerys starts to feel strange: hot and sweaty and dizzy. Xaro dragged her with some sort of love/fertility potion. Though her mind is muddled, she understands that the warlocks helped him. Xaro rapes her. She can't fight him. She's conscious mentally but her body doesn't respond to her commands. He goes on all night, wanting to put a child in her so she will be forced to marry him. Daenerys thanks the fact that she can't have children so she won't be forced to marry him. She retreats into her mind, imagining all the ways she's going to kill him.

At dawn, Xaro finally falls asleep. Daenerys leaves the room but what she finds in the part of the palace reserved to her and her men horrifies her. Her Dothraki guards were killed and so were her handmaidens, Irri and Jhiqui. Doreah was stabbed, she's dying but she has enough time to tell Daenerys that the warlocks took her dragons. Jorah, Sirys and her bloodriders arrive in that moment. Daenerys orders them to get her khalasar into the city, seize Xaro and kill every one of his guards who will try to fight for his master. Daenerys executes Xaro herself – she slits his throat with her dagger. She takes the key from his neck and opens the vault. Inside it's full of gold and jewels. At least he wasn't lying about being the richest man in Qarth.

Daenerys orders her Dothraki to take every precious thing they could find (not only gold and jewels but also spices, fabrics etc) and to put them on the eighty-four merchant ships Xaro owns. Among the ships Xaro owns there are thirteen galleasses, military ships developed from large merchant galleys (they were larger, higher but slower than regular galleys, though far deadlier). One of those ships, the fastest one and also Xaro's favourite, was called 'Silken Cloud'. Daenerys chose that as her own personal one and renames it 'Stormborn'.

She goes to the House of the Undying to take back her dragons. She is magically separated from Jorah and Sirys who came with her. She finds herself in an empty circular room with many doors. She passes many doors and inside every door she sees a vision.

A beautiful, naked woman being ravished by four dwarves.

A feast of slaughtered corpses holding cups, spoons, and food, with a dead man with a wolf's head sitting on a throne wearing an iron crown.

Daenerys' childhood home with the red door in Braavos.

A throne room with dragon skulls on the walls where a king resembling Aerys II Targaryen sits on a barbed throne and appears to give the order to burn the Red Keep during the Sack of King's Landing.

A room where a silver-haired man (presumably Rhaegar Targaryen) names his son Aegon, says the child is "the prince that was promised", then plays a harp.

Viserys Targaryen's death.

A tall lord with copper-skin and silver-gold hair beneath a banner of a fiery stallion, with a burning city in the background.

A dying prince (likely Rhaegar Targaryen) mutters a woman's name with his last breath, rubies flying from his chest.

A blue-eyed king who casts no shadow raises a red sword in his hand.

A great stone beast takes wing from a smoking tower, breathing shadows.

A corpse standing at the prow of a ship with bright eyes and grey smiling lips.

A blue flower growing from a chink in a wall of ice, filling the air with sweetness.

Other visions are supposed to tempt her to stay like the vision of the snowy, ruined throne room of King's Landing (she turns away before touching the throne) or the tent with Drogo and Rhaego inside.

Finally, she reaches the chamber of the Undying. She finds the dragons chained to a pedestal in front of her. She's about to free them when Pyat Pree appears and explains that she and her dragons are the source of his restored magic. He calls her 'mother of dragons' and 'child of three' and 'bride of fire', 'daughter of death'. Daenerys is chained as well by Pyat's magic. Daenerys looks at her dragons first and then back at Pyat, not really scared. She utters one single word: 'dracarys'. After a couple of tries her dragons unleash their fiery breath. Pyat is incinerated and both Daenerys and her dragons are free. The House of the Dying is destroyed.

Daenerys knows she has to leave the city immediately. Her Dothraki have cleaned Xaro's palace of anything valuable. Some of Xaro's slaves decides to come with her so Daenerys frees them. (Archmaester Marwyn comes with her as well, saying that she should visit Asshai – there's dragonlore there that can help her with her dragons and magic to learn if she's so inclined – and that he could be her guide there).

They set sail. Jorah wants to convince her to go to Astapor to buy the Unsullied, saying that her dragons are still small and an army of ten thousand men won't be enough to conquer the Seven Kingdoms. Daenerys agrees that she needs a larger army and that they will reach Astapor eventually but she needs to visit other places first.

-In Valyria:

Daenerys says that she wants to visit Valyria. Jorah and Sirys protest but she's determined. Archmaester Marwyn says that he's heard of a safe way to reach it but he doesn't know if it's true because he's never been there. Daenerys says that it's worth the risk. She feels like there's something she has to find there. Her dreams have been trying to tell her something.

Her fleet reaches the coasts of Valyria, far enough away to be safe, but only Daenerys and Sirys go to shore. They're covered from head to feet as a protection against the stone men. Her dragons are big enough to fly now.

They walked through the dense vegetation, the air hot and humid, making it difficult to breath. They don't encounter stone men on the way. Seems Archmaester Marwyn's info was correct. They reach the ruined city. Most of the buildings are completely destroyed, some still smoking, and everything is hot to the touch. Both Sirys and Daenerys cover their nose and mouth to protect themselves from the smoke. Sirys asks her what she's looking for but Daenerys doesn't know.

After some wandering, she's drawn to a specific palace, in the centre of the city. It's a high tower without a top. It looks almost intact if compared to the rest of the buildings. It has two high double doors, three times higher than her. Inside there's only a small circular room with black walls and a single, small, rectangular, polished stone table with a glass candle on it. Daenerys is curious about the glass candle, having heard of it from the warlocks who said that the glass candles are lit because of her and her dragons. She picks it up and the candle lights up. She gives the candle to Sirys but in his hands the candle is extinguished. Daenerys puts it in her bag then. They are about to leave when Daenerys feels something, like a shiver going down her spine. There's something there, something hidden.

Daenerys approaches the wall on her left. It doesn't look different from the rest of the room but it feels different. Daenerys remembered how Dumbledore had opened the passage in the cave where Voldemort had hidden the horcrux. She wonders if a blood offer would reveal whatever is hidden there.

She cuts her hand with her dagger and put it on the wall – the wall opens. Daenerys and Sirys descended a long stone staircase in the dark for what feels like forever until they reach a cavernous room filled with rough gems, shelves with books but especially what looks like armours and weapons made in valyrian steel – there are even chainmails that almost look like they are made of fabric instead of metal because of how light and thin they are (imagine the mithril chainmails in Lord of the Rings). One such weapon is a beautiful composite recurve bow – it was almost completely black, made of Blackwood*1 and she was willing to bet the sinews, bones and horns used as materials for it belonged to a black dragon –. The arrows are made of blackwood as well while its tips are made with Valyrian steel.

Among the books there's a dark red, leather-bound one that has inside the secret to produce valyrian steel.

Sirys and Daenerys return to the ships to call the others to help them empty the vault. They leave Valyria after that.

1 *This darkly-colored, rare magic wood is harder than normal wood but very light in weight. Any wooden or mostly wooden item (such as an arrow, or a spear) made from Blackwood, sometimes called 'Darkwood' is considered a masterwork item and weighs only half as much as a normal wooden item of that type. Blackwood trees are easily identified by their iron-grey bark and oak-like leaves. The heart-wood from this tree is a dark, charcoal grey.

Blackwood trees grow only in old-growth forests and are nearly as unbreakable as Ironwood but much lighter.

Blackwood is simply another name for Darkwood (Tree) though blackwood tends to be from younger growth than the older, Darkwood.

Blackwood is a variety of hardwood often prized for its springiness and flexibility. When aged and properly sealed and stained, the wood is pitch black with a glossy finish.

(Taken directly from Chronicles of Arn wiki/Blackwood_(Tree) – since Weirwood Trees are a thing in the Game of Thrones/A Song of Ice and Fire Universe, let's just say that other magical trees exist as well and the Blackwood Tree is one of them but that it existed only in the Valyrian Peninsula).