A/N: This is an AU crossover, Naruto characters on the world of Pokemon, just like by NarutoxGundam crossover. I'm using 4th generation Pokemon, so don't think I'm making them up. If you don't know what the new Pokemons are, check my profile page, I have the link where you can find them. Also, I'll been using the Japanese names for most of the 4th generation Pokemon, since only a couple of the American names have been released. Finally, this story is set on the Kanto region.


Pokemon! I Choose You


Start of a Journey

"Naruto, are you alright?" A brown haired boy asked the blond sitting next to him. Naruto snapped out of his trance, it was then that he realized that he had been staring at the front of the classroom for the past fifteen minutes. "I'm alright, why do you ask Chouji?" Naruto responded looking at the boy to his right.

"Well there's only like ten minutes left to class, is the last day before summer vacation, and you're still awake." Chouji said. "I mean look at Shikamaru, he's been asleep for the past half and hour." The brown haired boy added as the pointed at the teen sleeping to the blonde's left.

Naruto looked to his left before looking at Chouji. "Precisely, it's the last day of school. Iruka-sensei will announce if anybody from this class was one of the three students chosen for the program, I studied a lot to try to pass the written exam." The blond explained. Chouji examined his friend for a couple of moment before bursting out laughing. "…you…studying…that's priceless…." The brown haired teen said between laughs.

The blond glared as his friend continued laughing. "I'm serious," Naruto started. "I even asked Shikamaru to help me study for the exams." The blond explained.

Chouji calmed himself before looking at the blond. "Do you think Shikamaru will pass? I'm sure he got a hundred on the written exam." The brown haired boy asked. Naruto shook his head at his friend's question. "I also think he aced the written part, but it doesn't matter because he fell asleep and missed the practical exam." Naruto said. Chouji looked at the sleeping teen and sighed. "So much potential and yet…" The brown haired boy whispered.

"Ok, before you all leave for you vacation, I have an announcement to make." A man with brown hair tied up in a ponytail and a scar across his face said, the whole classroom went quiet after their teacher's words. "I'm please to announce that two student from this classroom where selected to be part of the Trainers Program, sponsored by Sarutobi-sama."

It seemed that every student, that was awake, leaned forward as to be closer to their teacher.

Iruka cleared his throat before smiling. "Uchiha Sasuke and Uzumaki Naruto" The teacher said as his smile widened.

Most of the student in the classroom gasped. Everybody expected the raven haired prodigy to be selected, after he came from a family full of masters and trainers, and had and incredible academic record. But it came as a surprise to them when they heard the blonde's name, even knowing who his father was.

Naruto and Chouji stood quiet as they looked at each other, each wondering if they had heard the name right. Both teen shifted their gaze towards their left after hearing some sounds. Shikamaru yawned as he open his eyes slowly. "Hey guys," The black haired boy said, looking at his right. "Did I miss anything?"


Naruto walked to his teacher at the end of class, both Shikamaru and Chouji had said that they'll be waiting for him by the entrance. "Hey Iruka-sensei" The blond exclaimed as he reached the teacher.

"Ah, Naruto-kun, I was wondering when you would show up." Iruka said calmly as he organized the papers on his desk. "Some summer you have ahead." The brow haired man finished.

"So, it's true, I didn't hear the wrong name." Naruto exclaimed as his eyes shone.

Iruka chuckled at the blonde's outburst. "Here let me show you something." The teacher said as he went to his computer and opened two documents. "These are the Trainers Program exam's score, and it clearly states that Sasuke-kun tied in first place with a student from another class." Iruka said as he showed the raven haired boy's rank. "Leaving you in second place" The teacher added as he pulled out the other document on his computer. This one declared Naruto as rank two out of the entire school.

Naruto wanted to run, jump, shout, and even fly. He will finally carry out his dream of becoming a trainer, and maybe someday a master. "Thanks Iruka-sensei" Naruto exclaimed before running off to meet his friends.


Sasuke entered his family compound. Even if his face didn't show it, the raven haired boy was happy. "One step, one step closer to reach him…and surpass him." The boy thought.

The moment the Uchiha stepped into his house, the teen was capture in a bone-crushing hug. "Sasuke-kun, your principal just called, I can believe my baby boy is going to be leaving tomorrow." Mikoto said as her face saddened slightly.

"Mom…" Sasuke said in a low voice as his cheeks turned a couple of shades redder and the boy looked away.

"Your father is so proud of you. Starting at such a young age, even younger than Itachi." The black haired woman said as she wiped an incoming tear from her face. "Now, we need to prepare everything for tomorrow." Mikoto said as she took hold of Sasuke's hand and dragged the boy in before he could protest.


Naruto walked towards his front door. Chouji had insisted that they celebrate Naruto's achievement, three hours later, Shikamaru had to walk Chouji home because of the brown haired boy's indigestion.

The second the blond opened the door, he was showered by a rain of confetti and streamers "Congratulations, Naruto-sama" Came from inside the Uzumaki mansion. (A/N: Yeah, I'm making Naruto rich on this fic, so I don't have to worry about how he'll by the supplies he needs during the story.)

The boy stood on the threshold stunned. "How did you guys found out?" Naruto asked. "Easy, your principal just called." A young man with hair covering his right eye answered. Immediately a woman with long purple hair stepped upfront and hugged the blond boy.

"Yuugao-chan…I can't breathe." The boy managed to say. Immediately the young woman weakened her hold. "I'm sorry Naruto-sama; it's just that we're so happy that you were selected for the program." Yuugao said as finally released the blond.

"Didn't I tell you guys to cut that Sama crap?" Naruto said as he tied unsuccessfully to kid the blush on his cheeks. "It's really annoying after thirteen years."

"It's our way to show our respect." A man that gave the impression of having a clod said. "You're the lord of the Uzamaki mansion; it's our duty to honor you." He added before having a coughing fit.

"Yeah, yeah, I've already heard it Hayate-san" Naruto said as he tried to sound annoyed. "You guys are much more than that, you're like me family."

"Ahhh, that's so sweet." A man with unruly, bushy black hair said as he put Naruto on a head lock and started messing with his hair.

"Cut that out Kotetsu." Naruto said trying to fight off the older man. Kotetsu laugh at the blonde's struggles until Yuugao smacked him on the head. "Hey, I was just having some fun before Naruto-kun has to go away." Kotetsu defended himself.

"Now Naruto-sama, you need to get some rest, you need to by at Sarutobi-sama's early tomorrow." Yuugao said as said without leaving any room to discussion.

Naruto sighed and started towards his room with Yuugao leading the way. The blond looked back to find Hayate, Izumo, and Kotetsu giving him supporting nods. Naruto entered his room just as Yuugao was setting his pajamas on the bed. "I'll prepare your cloths for tomorrow." The purple haired woman said with a low voice.

The blond mood saddened. He knew that if he were to be selected, that he will have to leave, but now it seemed…real. "Yuugao-" Naruto was cut off as the older woman gave him a kiss on his forehead.

"We're all going to miss you." Yuugao said. "Naruto…kun"

"Yuugao…neesan" Naruto said before a group of tears ran down his face. Yuugao gave the blonde one last hug before leaving the room.


Naruto found himself on a strange place, everything seemed to be foggy. Naruto his left and right but was unable to find anything. Suddenly a figure appeared in front of the boy. He couldn't see his face, but somehow the blond knew it was a man.

The figure got closer; he was taller than Naruto and also had blond spiky hair. When the man got close enough, Naruto recognized him. "You" The blond growled as the man closed, the teen's hands closed into a fist. "What are you doing here." The boy said with bitterness on his voice.

The man stopped in front of the teen and smiled. "Why are you smiling?" Naruto asked as his anger rose. "I don't need you; I never have and never will." Naruto shouted as loud as he could, the man in front of him merely continued to smile. "I DON'T NEED YOU"


Naruto woke up startled and sweating. "Naruto-kun, are you alright?" Yuugao asked standing next to his bed.

The blond took a couple of seconds before calming down and nodding at the purple haired woman's question. Naruto descended his head towards the pillow before abruptly sitting back up. "Wait a minute. Isn't it today…?" The boy asked looking at the woman by his bedside.

Yuugao smiled warmly before nodding and placing a box on the blonde's hands. "What's this?" Naruto asked confused as he started to examine the little box.

"It's a gift, from Arashi-sama." Yuugao answered calmly. Naruto froze the moment the words left the woman's mouth. "He said to give it to you the day you become a trainer." She explained.

Naruto's gaze went from the young woman back to the box. "From my father?" Naruto asked with uncertainty. Yuugao nodded as she gave the blond a reassuring smile. Naruto opened the box to find to objects.

The first one was a blue headband with a green leaf-like symbol on its center. (A/N: The headband is not like the ninja ones, this is like Brendan form Pokemon Sapphire/Ruby/Emerald) The second object was a purple necklace; Naruto had never seen a more amazing piece of jewelry before. "Why?" the blond asked taking both the headband and the necklace. "Why did he have to leave me something like this?" The boy said clutching the two articles as tears started to run down his face.

Yuugao immediately embraced the boy. "Naruto is alright, just calm down." She said with a motherly tone. Naruto calmed down after a couple of minutes. "Well, you have to take a shower and get ready; you need to be down at Sarutobi-sama's in an hour." Yuugao said as she set the teen's cloth at bedside before leaving the room.

Thirty minutes later, Naruto stepped out of his room wearing a sleeveless black jacket with white outlines, a navy blue undershirt, and black pants. He also had the blue headband on his forehead and the purple necklace around his neck.

"It looks good on you." Izumo said as Naruto walked down the stairs. "Yeah, people may not notice how much of a brat you are." Kotetsu teased, which earned him another smack on the head by Yuugao.

"We have a something to give you before you go, Naruto-sama." The young woman said as she stepped closer to the blond.

Naruto's eyes widened when Yuugao placed a pair of black and blue glove on his hands. "Remember, we will be waiting for you to return." Yuugao said softly before giving at the boy a kiss on the cheek. "Do you're best." Izumo said placing a hand on the boys shoulder. "We know that you'll do great." Hayate said placing a hand on Naruto's other shoulder. "Try to don't mess things up." Kotetsu added as he ruffled the teen's hair.

The blond looked back one last time before walking out the door. A single tear ran down his cheek the moment he heard the door shut.


Naruto entered the lab. "I'm supposed to meet the Old Geezer on the main room" The boy thought. Once the boy arrived at his destination, he was met by a big blue fish-like creature. "Swampert" The Pokemon exclaimed as he rush to hug the blond.

"Swampert…get off me…yeah it's nice to see you too." The boy said as he struggled against the water-type Pokemon. Naruto managed to release himself from Swamper's hold and looked around the room.

Naruto immediately saw the raven haired boy leaning against the wall, but what caught his attention was the other boy with long black hair leaning against the opposite wall. "I should have known that you'll be the third one, Neji."

The black haired boy smirked before starting towards the blond. "There should be at lest one worthy trainer among us." Neji said as he reached the blond.

"Well, I'm here so, what are you doing here?" Naruto shot back with a smirk on his own face.

At that moment, the door to the office opened and an elderly man with a lab coat stepped out. "It's about time Old Geezer." Naruto exclaimed. "Patience is a virtue for every trainer, Naruto-kun." Sarutobi said as he reached the two boys and the Pokemon at the middle of the room. "Swampert, could you get the stuff from my office?" The old man asked. The water-type Pokemon merely nodded before waking towards the door his master had just come out of.

Sarutobi waited until Sasuke joined them at the center before starting. "Well, I don't think I need to tell you why you're here. You have been selected for this year's Trainers Program, and you'll start on your journey to excellence today." Sarutobi said with a hint of pride in his voice. Immediately, Swampert came back with a pushcart.

"First, I'll give you this…" Sarutobi started as he picked up three devices, each one of different color, from the cart. The old man handed Sasuke the blue one, the purple for Neji, and Naruto received the red one. "This will be you Pokedex, they'll work as your Trainer ID car, and a digital encyclopedia with information about all the Pokemons discovered so far."

Sarutobi waited for the three boys to nod in understanding. "Now," The old one walked behind the cart. "You already know what this year's set of starters is, right?" He waited for a collective nod again. "Well, normally the trainer with the highest score will get to choose first, but since Sasuke-kun and Neji-kun tied, I'll let you two decide." Sarutobi said.

"Let Sasuke-kun choose first, I doubt he'll choose the Pokemon I want." Neji said, mocking the raven haired boy with the suffix.

The Uchiha glared at the older boy before walking towards the cart. There were three Pokeballs; each one had a mark under them: a leaf, a flame, and a drop of water. Sasuke reached for the one over the fire sign and took it. "Just like him" Sarutobi thought.

Sasuke looked up at the old man's face. "Is there anything more? Or may I go now." The raven haired boy asked. "You may go." Sarutobi answered, nodding to the young Uchiha before the teen walked away.

"What's his problem?" Naruto thought as Neji walked towards the cart and picked a Pokeball, Neji smirked as he held it on his hand before nodding towards Sarutobi and towards Naruto.

"Be there, please be there" The blond thought as he walked towards the cart. Naruto looked down and smiled as he saw the Pokeball over the leaf mark waiting for him on the cart. "Was this one your starter of choice? Naruto-kun" Sarutobi asked with curiosity.

The boy looked up at his elder and nodded. "Interesting, he claims he hates him but yet…" Sarutobi thought as Naruto took the Pokeball on his hand.

Naruto couldn't wait anymore; the blond opened the Pokeball the moment he got it on his hand. A white light came out of the small red and white ball and stated to take form. Standing on the cart was a green and brown turtle-like creature with two small leaves on his head. "Naetoru" The little Pokemon exclaimed, happy to be out of his Pokeball.

Naruto's eyes shone the moment he saw his Pokemon. "Hi, my name is Uzumaki Naruto, I'm your new trainer, let's do our best." The blond said smiling at the small creature. "Nae?" Naetoru examined the boy for a couple of seconds before jumping on Naruto's arms.

"It seems like your Pokemon has already grown fond of you." Sarutobi chuckled. "Now Naruto, before you go I have something to give you." The old man said before reaching to his pocket. "Konohamaru couldn't be here to see you off, but he asked me to give you this." Sarutobi pulled out small orange case. "For you to put your badges in."

Naruto took the case and smiled. "Tell him I say 'thanks', and that I'll be waiting of him to become a trainer too." The blond said; at which Sarutobi merely chuckle and nodded.

"There's one last thing." Sarutobi began as he took out a small yellow device. "This one is from me to you. It's a Pokemon Navigator or PokeNav for short. It's a digital map, a phone, and it records information of some of the trainers you encounter." The old man explained as he gave the device to the blond.

"Now, go out there and make us all proud" Sarutobi said giving the blond a warm smile.

Naruto nodded before letting Naetoru down. "Bye Old Geezer, bye Swampert." The blond exclaimed as he ran towards the door. "Naetoru" The grass-type Pokemon said as he followed his trainer.

"It starts now; from this day on I'm a Pokemon trainer. Someday I'll surpass you, and I will become the best Pokemon master, I promise you…Father."