RAIM/MLP crossover, special story arc

Chapter 1 - Children of Harmony

Me: This will be the longest story arc I have ever written, it will also be the most action packed and suspenseful one. Though you may become extremely confused (unless you watch doctor who, then in that case it will make sense) because of the time periods. Stay with me though...

Somewhere in space and time and the fabric of reality...

"Everything is coming together perfectly, all that is left is the children" said a woman watching multiple television monitors. A man walked into the room and said "The scouts are ready to commence retrieval of the children" the woman grinned and started laughing, she then said "Those three idiots never knew their entire lives have been orchestrated since the very beginning. It all started with that dimwit Robert, then came Tid, and lastly Itachi" the woman then started laughing maniacally. After a while longer of laughing, the woman sat down, frowned and said "Though not all threats haven't been eliminated... There is still them. But no matter, Commence retrieval!" She then spun around slowly in her chair and continued watching the monitors.

It was a normal morning in Equestria, the suns glistening rays over the horizon refracted off of the Crystal Heart in the Crystal Empire causing a large rainbow to span atop the scenery. After the war ended and Luna was defeated, the world was finally at peace. The dream of a world with no war whatsoever was finally achieved.

I had just woken up that morning, I stood up out of bed, stretched, yawned, and went and took a shower. After I was done taking a shower, I got dressed and walked over to the balcony. I stood there taking a deep breath of fresh air as I watched the sun beautifully rise over the horizon, signaling another peaceful day in Equestria. I took one last look at the sun rise before I walked downstairs into the kitchen. As I walked into the kitchen I swung around in front of Vinyl and kissed her on the lips saying "Morning my beautiful angel" she blushed heavily as she kissed me back saying "Good morning my handsome devil" I had a small chuckle as I asked her "So where are the two monsters?" She smiled saying "They are upstairs playing with there toys, breakfast is almost ready, could you bring them down here?" I laughed "Will do". I walked up the stairs and went into Adam and Concordia's room to see the two playing around. I watched them for a few seconds thinking 'They are already three years old, yet it feels like it was so recent' I picked them up and carried them down stairs. When I went back into the kitchen I set the two of them in their high chairs, and walked back over to Vinyl.

After we were finished eating breakfast, I again hugged my wife from behind, resting my head over her shoulder as we swayed looking at the countryside scenery through our window. I said to her "I think I might have, but have I ever told you that it was a great idea moving out here?" Vinyl nodded and replied "It was a great thing, you coming to this world, and into my life in the first place" I smiled hearing that. As I was looking at the clouds in the distance... I noticed something. They had all gone still, frozen in suspended animation in the sky. I looked at Vinyl to see that she also was paused. I let go of her, but as I walked away I grasped my heart as a sharp pain went through me, it hurt like nothing else before. I knelt to the ground "Something is wrong, I have no wounds, no illnesses" i hen fell face flat on the tile flooring. I looked up at the kids to see several men in black jumpsuits taking them away. I reached out saying "No!" As I was motionless, unable to move, or help in anyway. I just lied there helpless. They then disappeared as I lied there, almost in tears. A few seconds later everything resumed. Vinyl upon noticing me on the ground, helped me up asking "What happened?" I just continued staring blankly at where the kids were saying "I couldn't save them, I coul... dnt... save..." Vinyl then asked me frantically " Save who from what?" I turned to her and said "They took them, our kids, and...and I couldn't save them" Vinyl then let me go as she searched around the house at a very fast speed. A few minutes later Vinyl came back to the kitchen and said "They are gone, both of them" she then started to cry, as I walked up to her and embraced her, petting her head.

After an hour or so, a sound that I had not heard in a very long time suddenly echoed throughout the house, the familiar whirring noise only signaled the arrival of one person and one person only. Then the blue box appeared right smack in the center of the living room. The door to the box opened revealing none other than the Doctor Whooves himself. He looked at me dead in the eye and said with a serious voice and a frown on his face "Get in, your life and millions of billions of others depend on what will soon happen" Vinyl and I then walked into the blue box as it disappeared into nothing.

As we got going I asked The Doctor "Does this have anything to do with the fact that my children were just kidnapped?" He nodded his head saying "This has almost everything to do with that, but yours aren't the only ones" the sharp pain in my chest happened again as I fell to the floor, tightly grasping the area of where my heart was. Doctor Whooves nodded as he started inputting coordinates into the TARDIS. Then the place shook wildly as we were being transported through space. The shaking stopped as the doors to the TARDIS opened, allowing Tid, Rarity and Itachi to walk in. Vinyl helped me back onto my feet as the pain increased to excruciating levels. I winced in pain, everyone then came towards me to try to help. As Doctor Whooves came over I said "Doctor, forget about me, I know what is going on, go to my dimension, sixteen years ago" he nodded as he ran over to the control panels flipping switches as we were about two teleport to another dimension. As The Doctor flipped the last switch the place rocked even wilder than before as we were breaking through the fabric of reality. After a few seconds it stopped again. The door to the TARDIS opened. The teeth in my mouth started to grow sharper as the infernal rage that I was keeping pent up inside of me was growing larger and trying to get out. I looked at Whooves and said "In that nearby overgrown apartment complex, on the fourth floor, you will find a emerald amulet... Grab it... And if you see a scientist... Grab him too... Quick before I tear this place apart" he nodded, changed into his human form and ran as fast as he could. I then looked at Tid and said "Restrain me at all costs, until he gets back with that amulet" Tid nodded and helped everyone restrain me.

As minutes passed by, my slowly changing form was becoming even more and more apparent. As they were holding me down, Vinyl asked me "I thought you had rid yourself of the darkness?" I nodded, trying my hardest to speak clearly under all of the pain, I said "I did... But when I rid myself of the darkness within myself... It became a side effect that I can hardly contain my madness and rage anymore... Now of days it only takes setting me off, to almost go into my rage form." "So what is this amulet you sent him after?" "It helps me keep myself under control... He better return with it fast". The pain continued to grow as I tried harder to hold the rage back from taking control. About five minutes later, I said "It's too late... I can't keep it back!" I was then enveloped by the cloak of green and black energy. My face was the last thing to be enveloped as I was now being controlled by a blind rage. I was in so much darkness, I couldn't see. As I was looking around the blackness that I was now hovering in, two large white eyes appeared. I yelled out to it "What are you?" It laughed "I am the rage you contain within yourself, I am the madness that rises from your fear. I am the embodiment of rage itself!" I replied to it "Release me from this darkness!" It smiled and said "Don't you want to save your precious kids, if so, hand yourself, your soul and mind over to my control, and I shall help you save them" "Never! If I do that you will destroy everything in your path!" It laughed a lot more and said "It is either you save your kin, or you save everything else, your choice" I then saw a glimmer of shining light in the distance and said "How about both!" I then took back control, as the rage died down back inside of me.

My vision cleared revealing the amulet that was now around my neck. I looked at Doctor Whooves and said "You found it" he nodded and replied "I also found this person, when you were talking about a scientist, I didn't know you meant this guy" Sideline then walked up and said "Long time no see!" The Doctor then said "Found this guy half dead and illness killing him in a lab. I gave him a miracle cure and he stood right back up" Sideline then asked The Doctor "It's happening isn't it?" He nodded. I then looked at the both of them and asked "Excuse me, but how do you two know each other?" Sideline then said with a grin "Well, remember when you first saw me and everyone else? The explosion was the result of a failed time traveling experiment, this guy here kind-of helped us" I nodded and asked "Now what is it you are taking about, what is happening?" Sideline looked at me with a serious expression and said "Well, over the coarse of training Ethan and Gaara, I had been approached by several people, attempting to get me to hand over them, saying that they were a 'threat' or that they were 'special' The Doctor then approached me and told me what was going on, and will happen" confused, I replied "I barely understood what you said, but, ok" Sideline looked back at The Doctor and said "Stupid just like the rest of humans" I continued scratching my head and asked one final question "What do you mean the rest of humans?" Sideline smiled rhetorically and said "With my brain and knowledge, did you seriously think I was human? I am the same as this guy here, I just happened to live on this planet, in this dimension, that's all" I tilted my head in shock and confusion.

The Doctor then said "I think that's enough mind warping confusion for one day, now let's find all of your kids shall we?" The Doctor then did a long expansive DNA search through space, and after an hour or so said "This is strange, I can't find any trace of them anywhere, the TARDIS says they must be outside the fabric of space and time... But that is impossible" Tid then asked demandingly "So you are saying they are dead?!" The Doctor shook his head frantically "All I am saying is that they are in between dimensions somewhere, they are nowhere, I can't track or find them" "Is there any way of finding them?" Sideline thought for a second and said "We would have to go through and search every rip in space or on a planet to pinpoint a location" The Doctor corrected him saying "Or we could attempt to trace the residual energy from where the kids were kidnapped" "Or that, I thought my way would be more adventurous" I looked at Sideline "We are looking for time, not adventure" The Doctor said to all of us "We are going to go back a few seconds before they were kidnapped, and try to see if we can spot any insignia or markings on the men who captured them, no one, and I mean no one will interfere with the events, or try to stop them, they were kidnapped, you can't change it... Got it?!" We all nodded. The Doctor replied "Good, now let's get a move on".

We arrived back at Vinyl an I's house about a minute before Adam and Concordia were kidnapped. The door to the TARDIS opened as all of us stood there and watched as the events of that morning unfolded. A few seconds passed as it happened again, everything froze, followed by four men in black outfits appearing out of nowhere. As Sideline observed the men appear, he suddenly blurted out "They are using a split second temporal displacement to slip through a crack in reality, and by creating a stasis moment in time, they are able to keep that displacement going for as long as they please" The Doctor nodded replying "Couldn't have said it any better myself... Wait... I know those uniforms" I looked at him and asked "And? Who are they?" The Doctor frowned "A cult led by a deranged woman who believes she can bring peace to the universe, through its complete destruction. But to destroy the entire universe, you need power, a lot of power" that is when the figures disappeared. We waited a bit longer until the past versions of ourselves disappeared before we went to retrace the energy.

After analyzing the wave energy, Doctor Whooves turned to us and said "Unfortunately, I couldn't get a trace of any location. I guess we have to do this the old fashioned way" Tid looked at him and asked back "Old fashioned way?" Sideline smiled and replied "Using the information we have... Which is almost nothing... It can take a few months to a few years until we can trace this back" I slammed my fist on the wall "We don't have that long! I need to find them... I swore I would protect them, but I couldn't save them" I started to cry. Tid then asked "What do we need to do?" The Doctor scowled and said "We have to resort to asking, finding connections, patterns, connect the dots" Sideline frowned adding "We need to hunt them down."

Back, somewhere in reality...

The strange woman was still watching the monitors, when the man walked back in and said "We have retrieved the children" the hearing those words, woman grinned as she thought 'One more step, just one last step, and I win' she looked at the man standing at the doorway and said demandingly "Lure them in, lay the crumbs out for them to find" the man nodded "Yes ma'am, right away" and walked off.

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Me: And so it begins, muahahahahaha! I think I might need two of myself just to absorb the full awesomeness of this moment *gets in TARDIS*

Few seconds later...

Me: other me now we shall laugh about how awesome this is. (Laughing in unison) hahahahaha!

*high five*

Me: Oh crap that created a parad...

*nothing*