Three months after the events of the warehouse, Kate is chased down the Valley of Gods in Utah. She has strange pen markings all over her fur and arms.
She is being chased by the FBI. She is cornered between two SUVs and a cliff-face. Dr. Jekyll advises her to surrender.
"Don't you remember, doctor. At the warehouse. What you saw."
He responds by shooting her down.
Claudette, also covered in markings, explores an unfinished skyscraper in New York City filled with the mysterious aliens.
"I see you…" She said as she made a pen mark on her fur. FBI agents corner her at the edge of the building.
"Just surrender, Claudette."
"What fun is that?" She smiles sadly before falling off the side of the building.
Finally, Hutch and Humphrey are at the Glen Canyon Dam, Arizona. The FBI had them cornered. Dr. Jekyll had personally shot them.
In Area 51, they have Aaron held up in a strait jacket and sitting on a chair. He was looking at what the people were doing around him.
They seemed to be putting block after block of this weird alloy. Dr. Jekyll enters the completed cell with body bags containing Aaron's friends.
"You know this cage won't stop me or my friends."
Dr. Jekyll seals off the door with him inside.
"This cell's material will keep anything from escaping." He explains.
"Is it good, are we sealed in?" Aaron asked.
Once confirmed, Aaron frees himself rather easily while Kate, Humphrey and Hutch emerge from the body bags.
"One problem, we can't escape." Kate said.
"Yes we are locked in…" He shook his fur and a vortex manipulator fell out. Aaron gave them a smirk.
"What about Claudette? She dove off a rooftop."
"She does that." Aaron put his manipulator and pushed a few buttons. "Three, two, one…"
A flash of light was seen as Claudette appeared in front of them.
Aaron starts to implant a nanorecorder in each of his companions' palms, explaining they are to activate it and leave themselves a message each time they have an encounter.
"When it flashes red, they'll know they've seen one of the creatures." Aaron explained.
Dr. Jekyll looks back for a moment and then casually fixes Aaron's hair.
"Why are you looking at me like that?"
"Look at your hand." He explained. Jekyll is horrified to find his nanorecorder is flashing. He presses his palm.
"How the hell did it get here?"
"Don't panic." Aaron said. "Turn around and fix my hair when I say so."
Dr. Jekyll turned to see the alien that Kate saw.
"I extrapolated the image from Kate's manipulator and projected it as a hologram."
Turing off the image, Aaron orders the gang to tell him what the alien looked like. However, no one can describe it.
"You see this is how these aliens work. They plant ideas in people's head while you're looking at the creature."
"But why are they here?" Humphrey asked.
"I wish I knew the answer." Aaron said.