By Superpower37

Disclaimers: I do not own.

Authors note: I'm thinking about doing an aftermath, but I'm not sure. This story takes place a few months after the movie.

Chapter1:Death Do Us Part

Alan Tracy walked into his dorm room in Wharton Academy.

"Hey Fermat" he said.

"H-hey A-Alan" Fermat stuttered. They weren't prepared for what was coming next. A loud pop came from outside in the grounds.

"What was that" Alan asked walking into the hallway in two strides.

"I don't know. It sounded like fire crackers" a student. All of a sudden, a kid ran into the hallway.

"GET DOWN! IT'S A SHOOTING" he yelled. The kids in the hallway ran into their rooms and got under a desk. A hooded man walked into the hallway and just started to shoot. One kid in the hallway panicked and screamed. The guy turned towards him and shot at him.

"Alan, no" Fermat whispered but Alan was already out of ear shot. Alan lunged at the kid and knocked him down. The guy couldn't see them so Alan pulled the fire alarm. The alarm caught the guy's attention long enough to allow some of the kids to get out.

"I'll get you kid" the guy muttered as he realized who had pulled the fire alarm. Alan pushed the kid out of the next exit and they eluded the guy for a while. Alan took this chance to try and contact his father.

"Baby Swan to Commander" Alan said using his code name.

"S-Science G-Geek t-to B-Baby S-Swan. W-What's w-

wrong" Brains answered.

"Brains, we need my dad and brothers. Firefly is already filled with water. We're going to need Thunderbird 1and 2 with the Firefly and the Mole in it. Tell them to hurry, it's an emergency. Fermat is okay. Please tell them that I'm sorry that I made them mad" Alan said checking to see if anyone was near him. He cut the connection to Thunderbird 5 before Brains could say a word.

Tracy Island:

The alarm went off and the boys and Jeff raced to the control room.

"What's the situation Brains" Jeff asked.

"A-Alan needs your help. H-He didn't tell me what was wrong, just that it was an emergency. T-The Firefly and the Mole is already in Thunderbird 2" Brains stuttered. Scott, John, Virgil, and Gordon looked at each other in fear. They each climbed in to their portraits and Jeff said 'Thunderbirds are go'.

Wharton Academy:

"Oh god" Gordon gasped as he saw a window shatter from the impact of a bomb. Once they landed, they got a list of the missing and dead and Alan was on it.

"Is he…" Jeff asked trailing off.

"He's not on the dead list, but he is missing" Scott said. John, Virgil, and Gordon dropped their heads in fear.

"We've got to find him before it's to late" Gordon finally said. Out of all the Tracys, Gordon was the closest to Alan. Gun shots sounded and they turned their heads.

"Y-You guys" a voice said. The Tracys welcomed the sound of Fermat's stutter. When they turned around they didn't see Alan with him.

"Fermat, where's Alan" John asked.

"I-I don't know. The last time I saw him was in the dormitory before we escaped" Fermat said. Scott, John, Virgil, and Gordon looked at each other and ran into Thunderbird 2. A few minutes later, they came out in the Mole and the Firefly.