Welcome again! I hope you've liked this story so far. It's one of my better creations. Anyways, I've had some complains about Spitfire and the Doctor being together… and that's exactly what I wanted. People always like one of the pairs more than the other, and I'm sure that you guys will be quite surprised by what happens in the end, but we'll wait for that till, I'm guessing, the end. I have also gotten some complains that I'm moving really fast with this story too, even If I'm reaching more than 5000 words per chapter, but then I reread my story and I think it's true, at least a little bit, so I'll either put more chapters into this story, or more words into each chapter. Just tell me in a review.

Chapter 3 Chaos over Equestria

The same morning that Derpy had found out that the Doctor slept with Spitfire, Princess Celestia had found Princess Luna passed out in her bed room floor. She quickly got medical attention and they told her that she would be fine, but that she wouldn't wake up till tomorrow morning, so there was no way for Luna to tell Celestia what had happened.

Princess Celestia decided to put Luna in her room just so she could keep an eye on her. The only two time she would have to leave her at all would be when she would have to raise the moon and in the morning the sun since her sister clearly couldn't do anything until after the morning came.

The Doctor had fallen asleep from lying on his bed. Even though he slept really well, the warmth and softness of his bed had caused his eyes to slowly drift off to sleep. He was too deep in a dream to hear Derpy come in.

She saw him sleeping and decided not to wake him. She also decided to wait for him to wake up by the chair that was on the side of his bed. It wasn't too long before he started stirring.

The Doctor had been having a strange dream where Derpy was about to seduce him, but before anything could happen he woke up. He turned around to look at his room since he was facing the wall. He jumped slightly when he saw Derpy sitting in the chair right next to his bed.

Derpy looked like she was waiting for the Doctor to say something first. He knew that he had to apologize for what he did. "Listen, I'm sorry that I brought someone into your house without telling you, but I didn't know what you would have said," he said looking at her.

This frustrated Derpy slightly, "What do you think I would have said?"

The Doctor was at a loss for words. He just looked down slightly ashamed. "This isn't me Derpy. I have to leave as soon as possible. I can't stay here any longer," he said after what seemed like hours of silence.

Derpy was surprised to hear this come out of the Doctors mouth. She had not expected him to say that at all. She couldn't hold back but jump up and hug him.

The Doctor wasn't expecting this at all and he fell back with Derpy on top of him. Luckily he was on his bed.

Derpy was crying, "I don't want you to go. You're the greatest pony I have ever met," she said as she was still hugging him.

The Doctor didn't know what else to do except hug her back, "I'm sorry, but I have to take care of this universe now. It's my job as a time lord."

She pulled her head out from between his shoulder and neck to look him in the eyes. "Take me with you."

The Doctor knew that it was only a matter of time before she would ask that. "I'm sorry, but it's too dangerous. You could get killed."

"I don't care. I'd rather be in danger than to be without you," she said as she leaned in closer to his muzzle.

The Doctor tried to lean back but his head was already as far back as he could go since he was lying on his bed. "But I can't let that happen to you. I don't know what I would do if anything where to happen to you," he said with Derpy still leaning closer to him.

Derpy couldn't help but do what she did next. She kissed him with all of her will power. The Doctor was shocked at what she was doing. His front two hooves tried desperately to find something to grab onto so he could break the embrace, but he found nothing. It wasn't because she was kissing him, it was mostly because he couldn't breathe.

Derpy finally pulled away when she needed to breathe too. "Sorry Doctor, I couldn't help myself," she said as she got off of him. "Please take me with you," she said as she gave him some puppy dog eyes.

The Doctor was still slightly shocked by what Derpy had just done, but he was still able to answer, "I'm not sure, I'll think about it, but only because it's your birthday."

"Yay!" she said as she hugged him again. She then got up and walk out of him room.

"Uhhh, this is all too much, I have to get out of here," he said as he got up too and headed outside. He didn't understand what was going on. It was like she loved him one minute and then the next they were just friends. "This is indeed a messed up universe," he thought to himself.

Discord, Nightmare, Trixie, Gilda, and Chrysalis had gotten the diamond dogs to help them. They promised them all the jewels in Equestria and revenge. Tomorrow night they would put there master plan into action, but first they talked about who should steel who. Of course the diamond dogs could take all of them, but where was the fun in that. The only pony that no one else could take was Rarity since Rover already called her.

Trixie called dibs on Twilight. She was sure that she could take her with the new spells that Nightmare Moon had shown her. Discord called Princess Celestia and Luna, since he knew Celestias weakness and Luna would remain passed out till the next morning. Gilda called Rainbow Dash since she knew her best. Queen Chrysalis called Princess Cadance since she had some unfinished business with her. Nightmare Moon would take Shining Armor since she knew most of his shielding spells and how to avoid them. Spot and Fido could still chose between Applejack, Fluttershy, and Pinkie Pie. In the end, since Spot was the smallest he chose Fluttershy and since Fido didn't want to kidnap the strongest pony of the ten, even though he was the biggest of the main three dogs, he chose Pinkie Pie. They let some of the tougher diamond dogs take Applejack.

There were only two things that they had to worry about and they were pretty much resolved. The first was that Princess Luna would have already been found by Celestia, but since she would be passed out till the morning of tomorrow she wouldn't be able to figure out that Nightmare Moon was loose again, and the second one was that if anypony would notice that Discords statue was missing then they would know that he was back, but the statue garden was closed on Wednesdays so they were pretty much in the clear.

All they had to do now was dig the tunnels under the houses of the ponies and wait till it got dark to individually take them and bring them to the magical cells that they made to keep all of the ponies in. There would be no way for them to get out once they were in since the only way they could open the cells was from the outside, and nopony would ever find them underground.

The Wonderbolts had done their usual routine, but onepony in particular was having a hard time concentrating. The image of a brown pony kept fogging up her head. Soarin' noticed this and tried to keep her in the game, but it was like playing football at night with sunglasses.

By the end of the day their trainer was extremely disappointed at his best flyers performance. "At least we don't have any special events coming up soon, but that does not give you an excuse for all of this. I know you had I mild concussion yesterday, so I won't go too hard on you, but I hope you can get your head out of the clouds before tomorrow," he said as he let them all hit the showers.

Soarin' decided to talk to her, "Listen, I know it's…"

"Save it," he said cutting him off, "I told you this would be a distraction. That's why I never tried."

"It's a distraction because you don't know if he likes you or not. I'm pretty sure I know that Rainbow Dash…" he was cut off again.

"Ya you're pretty sure, but that doesn't mean anything. I won't tell you that she doesn't like you, but I won't tell you that she does like you, because I don't know. But that's exactly what's eating me up inside. I need to know."

"Then go see him again," he said when they got to the showers. "I'm sure he feels something towards you."

Spitfire thought about it for awhile before she finally said ok, "But only if you ask out Rainbow Dash."

This surprised Soarin' and he could help but feel a little bit scared. He swallowed and said, "Ok, fine, sure," he said slightly nervous.

This made Spitfire laugh, "Come on let's shower then go find out if this is the end of our lives forever."

"I am not going to do a duet with her!" a very frustrated Octavia told the six ponies in front of her.

"I'd hate to agree with the stick in the mud but she's right, we can't play together," DJ Pon-3 said to the six ponies as well.

Today was Derpy's birthday, and they needed somepony to play some music at her house. Derpy had always wanted to have the best music players at her party, but the only way they were able to get them into the same room together was to trick them, but now they needed them to work together.

The sun had just set and they knew that Derpy was probably already heading home. They knew that Derpy though that she wasn't even going to have a party since her best friend Carrot Top was the one to always plan it, but she was out of town with a family crisis, so she asked her friends that Derpy knew to through her the best party they had ever thrown. They had never thrown a part before so so far it was the best.

Lyra Heartstrings and Bon Bon had been best friends since they were little fillies, but there next best friends were Carrot Top and Derpy. Not too long ago they had met Sea Swirl and Minuette, who were also friends since fillies, and started to hang out with them. When they first met Derpy they thought that she was weird and clumsy, but they had grown to become friends too.

Rose was a friend of Bon Bon's. They would always work at a store that sells candy and flowers for Hearts and Hooves day every year, so after awhile they started hanging out.

Amethyst Star was a regular customer at Daisy, Lily, and Roses flower shop, but she would almost always go on Mondays, which was one of the two days that Rose worked at the shop, to get a rose so she could put it on her dead sister's grave. It had been several years since she had died, but she was showing her how much she loved her. Luckily she was happily married and had a daughter that she would go on picnics with.

The strangest picnic that she had gone together with her daughter, some strange rainbow colored pony had tried to help her open a jar. Then she cut the grass. She still couldn't explain what was wrong with her, but she had become popular for performing a sonic rainboom so she was probably just having an emotional breakdown.

Rose had been invited to the party and she was allowed to bring a guest. Since Daisy and Lily had to go to a weeding in Manehattan, she decided to invite Amethyst since her husband took her own daughter to his parent's house. She couldn't go because he had work to do, but she only had to work from12a.m. to 3 a.m. and since this party would most likely be over before that she decided to come.

She didn't know Derpy that well, but everyone in Ponyville knew about her. She was the cluts that had destroyed town hall, but everybody that knew her said that she was the nicest pony they had ever met.

"Please?" Lyra asked them again, "At least for one song, then you can keep switching so both of you can play separately," she suggested.

Octavia and DJ Pon-3 both looked at each other and said, "Ok fine, but only one song," at the same time. For two ponies that had nothing in common they surely did agree a lot.

The Doctor hoped that he wasn't late. He knew that Derpy had finished delivering mail so she was probably heading home. He lost track of time, and was really far away from her house when the sun started going down.

He was in view of the house when he noticed two figures at the door. One was a light cornflower blue and the other was a light brilliant orange. 'Oh my gosh! What are they doing here?' he thought to himself as he started galloping faster.

"You see! I told you I had it in me!" Soarin' said extremely happy that Rainbow Dash had said yes without even thinking.

"Ya sure, you knew you had it in you," she said sarcastically. Even though Soarin's day had gone perfect, it was now Spitfires moment of truth. She knocked on the door and she heard somepony head towards the door.

Lyra opened the door slightly confused. She knew that the Doctor and Derpy would have a key so she kept wondering to herself, 'Who the heck would Derpy be expecting at this hour?'

She nearly passed out when she saw the captain and the co captain of the Wonderbolts at the door. Everyone else noticed that Lyra fumbled slightly to stay up and turned in her direction to see what had happened.

Then almost all of them fainted too, except for Octavia who thought she was too cool to become over emotional about it and DJ Pon-3 because she had preformed for them several times before. "Hey! Spitfire! Soarin'! What brings you guys here?" she asked them like she talked to them all the time.

"DJ! What's up!" Soarin' said remembering the pony that went to almost every single one of their events.

Spitfire was extremely confused, "Are we at the wrong house?" she asked Soarin'.

"Spitfire! Soarin'!" the Doctor yelled coming up behind them. They waited for him to approach so they wouldn't have to yell. "What are you guys doing here?"

Soarin' was the first to speak but was at a loss for words since he wasn't the one who was going to ask him out, "Oh, um," he said as he pointed to Spitfire so she could take it from there.

Spitfire was still slightly confused as to why there were a bunch of ponies in his house, "Um, I have something to ask you," she said slightly blushing. She didn't expect to ask him like this.

The Doctor quickly turned his head backwards as if he was looking for somepony, "Quickly get in," he said as he gestured for them to go inside. Once they were inside they heard the rest of the ponies say thing like 'cool' or 'oh my gosh' and stuff like that. The Doctor told them why there where that many ponies in his house, "Sorry, it's Derpys birthday today, so most of her friends are here," and then the Wonderbolts understood everything.

"Oh, sorry, if it's a bad time then we can come back tomorrow if you want," Spitfire said when he was finished talking.

"Oh, no. I'm sure anypony would love to have the Wonderbolts at their party."

Soarin' felt like a third wheel so he decided to go talk to DJ, "Um, I'll be over there," he said pointing to where DJ was.

The Doctor and Spitfire nodded in agreement, then he left. The Doctor remembered that Spitfire wanted to say something, "What was it that you wanted to tell me?" he asked curiosly.

Spitfire had just remembered the whole reason why she and Soarin' where here in the first place, "Oh, um…" she was interrupted when Bon Bon yelled, "She's coming!"

They turned off all of the lights and DJ and Octavia got ready to play. Derpy walked in and said, "Sorry I'm late Doctor. I got some mail messed up."

Then everypony except Octavia, DJ, the Doctor, Spitfire, and Soarin' jumped up, since they were already standing up, and yelled 'surprise!'

Derpy was surprised by all of this since she thought she wasn't going to get a party this year, "Oh my gosh! Thank's guys!" she said as she went to greet all of her friends. She greeted Lyra first and she asked her, "How do you know the Wonderbolts?"

Derpy was confused by what she had said, but then she noticed Soarin' next to DJ who was playing (whatever song she plays) with Octavia. Then she noticed the Doctor next to Spitfire. This left Derpy slightly hurt that he would have invited her and Soarin' without telling her. She was about to say something but then the sun came up.

Several minutes ago, simultaneously.

Trixie was waiting for the signal that would allow her to take the pony that she had hating since she had been humiliated her, but the worst past was that she had to wait underground next to two diamond dogs that smelled like they had never showered in their lives. After what felt like almost an hour her horn gave a small slash. She was pretty sure that this was the signal.

The diamond dogs dug up the last two feet to pop up in the library that Twilight was living in. She climbed up the stairs that lead to her and Spikes beds. She quickly put a noise canceling bubble around Spike and trapped twilight in a sound and magic proof bubble.

Twilight felt herself being lifted up and awoke to Trixie smiling right below her. She yelled, "What is this," but Trixie couldn't hear her and had already started taking her to the hole in the ground.

Twilight yelled, "Spike!" as loud as she could but she had a really strong feeling that she was trapped in a sound proof bubble, but that didn't stop her from yelling. Once they were underground she noticed that Trixie was putting dirt back in the tunnel which made it look like there was never one in the first place. Now there was no way Spike could ever find any evidence of where she went.

Trixie laughed to herself, "Ha ha ha, Twilight, consider us even."

Rover came out of Rarity's floor, right next to her bed. She thought she heard something but she was too tired to check and just rolled over in her bed. Nightmare Moon had given the three dogs and a guard dog a special wand that she made for then so they could put everything back exactly as it was when they were finished and to create a noise canceling bubbled so their victims wouldn't make any noise.

He quickly trapped her in the bubble and brought her into the hole he had come out of. She felt herself moving and also screamed for help like Twilight had. Some diamond dogs grabbed her once she was in the hole and started taking her to the prison they had ready for her. While Rover waved the wand again and the hole started to repair itself like it had never happened.

"Oh, I've got to get me one of these," he said as the light on top of the wand flickered and died. He dropped the wand and started running to catch up to the dogs who were taking Rarity. The walls of the tunnel were being quickly sealed right behind him.

The same thing happened with Spot. He dug in, waved his wand, went back in the hole with Fluttershy, waved his wand again and it seemed like nothing had happened at all.

Fido had to go upstairs to get Pinkie Pie, so his wand had an extra spell that let his steps become perfectly quiet, and the diamond dog that got Applejack had that extra spell too since Applejack also had a room upstairs in her house.

Queen Chrysalis and Nightmare Moon went to the house that Shining Armor and Princess Cadance were living in now. They knew that they had to keep them as far apart as they could, or else they could conjure up another one of the force fields that had knocked back Queen Chrysalis and her army. So as soon as they put each one of them in the magic and noise proof bubbles they separated them (since they were sleeping together) and handed them down separately, just to be extra sure that their love bond wasn't strong enough to break the spell.

Gilda was the onlyone who didn't need help from the Diamond Dogs, since Rainbow Dash lived in Cloudsdale. She knew that she lived right on the edge of it so it made it easier for her to kidnap her and take her underground after that. Nightmare Moon gave her a wand too so she could capture her in a bubble too.

The dogs dug up a hole right through Celestia's floor, and Discord jumped out quickly and grabbed her horn. "Celestia! Are you happy to see me again?" Discord said happily as he drained her of her magical powers. It tickled him slightly. Discord loved when things didn't make sense, like a hole appearing on the 33rd floor of a building.

Celestia was feeling weaker by the second, "Uhh," she grunted as she tried to pull away, "How…ugh…did you…ahh…break out?" she asked still struggling to break free.

"I don't really know," he said smiling. He loved the sound of her struggling. "I was standing there incased in stone when a felt a sudden rush of energy in my leg. The next thing I knew it was spreading throughout my entire body and then I came back."

The Princess had lost too much energy and her legs gave out. She was still able to say, "Ughhhhh…are you…going…to kill…" Discord interrupted her.

"Oh don't strain yourself Celestia, I merely plan on imprisoning you. I would never kill a creature as beautiful as you," he said as his lips were about a centimeter away from hers, "I can't say I ever fully got over my felling for you," then he backed up and grabbed Luna. Now that he had both of them he went down the hole that lead him back to the ground, and put everything back the way it was.

He couldn't help but laugh, he was finally going to get to rule Equestria, even though that's not what he really wanted at least he'll get what he wants when this is all over. 'It's all falling into place,' he thought to himself.

As the tunnel was fixing itself behind him, Celestia started saying something, "You…truly…are…evil," she said still extremely weak.

This made Discord stop. He was slightly hurt by what she had said. He moved her around to where they could see eye to eye. At first he had pure seriousness on him face, but then he started laughing, "You seriously thing I'm the evil one? I'm not the one who wanted it to stay night time forever. I'm not the one who wanted to take over all of Equestria. I'm not the one who wanted to imprison everyone. I'm not the one who wants to torture all of the others just to get revenge."

Celestia was confused by this, "Then…who…is?"

"All of the others, well except for the Diamond Dogs. They just want jems," he said truthfully.

Celestia could tell that he wasn't lying, but she still didn't understand why he was doing this then, "Then…why…" she was interrupted.

"…are you doing all of this? Because it's the only way to prove something. Something I should have proved a long time ago."

Celestia still didn't understand something, "Then…why…did…you attack…" she was interrupted again.

"…Ponyville?" he said finishing her sentence, "Because, just imagine being trapped behind stone for more than a thousand years. When you first trapped me, yes I was out of control, but who wouldn't be with that type of power? I felt invincible, but then you trapped me in stone, and I had a thousand years to think about what I had done. I know what I did was wrong, but I was young and foolish.

The second time you let me out I had so much power and energy. At first I thought I might be able to control it, but some just kept slipping out, and when I saw that the first thing you were going to do was encase me in stone again, I just decided to go all out and have fun before my life would be ruined again. I couldn't have even gotten close to you without being attacked by your guards or worst of all you and I wanted to tell you in person that I had changed, but you never gave me a chance.

I waited for you to go after me when the six ponies that wheeled the elements failed. I thought you would go after me, but no. You're too scared to face the truth. You still loved me and where afraid that I would beat you because of your feelings. Well I never wanted to beat you. I wanted to talk to you, but now I'll have the chance, soon, very very soon," he said as they got to the prison cells.

He placed Celestia gently in and closed the door behind him. She could feel her strength coming back but she was still too weak to stand up, but she was able to say one thing, "Discord!" he turned, "I'm sorry."

He faced forward again and kept walking, "Like I said, we'll have a chance to talk soon, nut not right now."

"Where are you taking Luna!"

"Well we can't leave her here, what would happen if somebody actually found you. It would be way better to find you without your sister to give us enough time to capture you again, or, if all else fails, runaway before you turn us into stone."

Then she lost sight of him in the darkness. Celestia felt terrible. Not just because she was locked up in this prison, but because Discord wasn't actually a bad guy. Now that she thought about it, he never really hurt anypony either time he went on a rampage. He just needed somepony to talk too, but she had been too blinded by what she saw to see that he needed to release all of his uncontrollable energy. She couldn't help but sadly say, "Discord…" into the never ending blackness.

They had ten different cells in ten different locations in all of Equestria, and they were all underground. There would be no way that anypony could find all of them and release them all without any of the villains noticing. They had planned for everything, everything except the ponies in one household.

Discord started heading in the direction where they all agreed to meet when they had captured all of the ponies, and after he left Luna in another cell still passed out, he got out of the tunnels and flew to the meeting place. It was kind of dark to see where he was going so he decided to make it sunrise. He knew that everypony would know something would be wrong when this would happen, but it didn't matter. They already had the only ponies that could defeat them.

All of the ponies in Derpy's house looked outside and rubber their eyes to make sure they weren't seeing things. "What the heck in going on?" Rose said looking out of a window.

The Doctor had been in Ponyville long enough to know that this wasn't supposed to happen.

Discord decided that since he could do whatever he wanted to convert Ponyville into the chaos that he had converted it into last time he was there. Which ment that some houses started floating in midair.

This is what had happened to Derpy's house. The ponies inside could feel it going up and grabbed onto something. Once they felt themselves stop moving they looked outside again. It was complete chaos. The Doctor could remember on one other event that happened when Ponyville looked like this, and that was when Discord was set free from his stone prison.

"What's going on?" Sea Swirl asked.

"I don't know," Minuette answered.

It was the Doctors turn to answer, "Discord."

All right! I'm finally getting some reviews! I don't care if they are good or bad, but as long as you review I'm happy to write. If I get reviews that say this story is good then it'll make me feel good, if I get reviews that say it sucks of course I'll feel bad, but some people just have different tastes, but the people that send reviews that say the story is good but I'm doing this wrong are my favorite. It tells me if I'm moving too fast with the story, if I'm making too many mistakes; if I have too much going on, you know stuff like that. Please review. Tell me that you love it, that it sucks, that you love it all except for something, or that you hate it except for something. Oh you know what I mean. Please contact me guest reviewer number 4.