Hello everyone! Sorry this took SO LONG! Life gets in the way, and boy did mine get in the way, let me tell you. I love writing, but apparently people in my family don't seem to give me time to do so. I finally got around to getting some alone time and this is what became of it! Enjoy chapter 3 of The Secret Agent Conundrum!

PS – Prady and Lorre own it all...I own nothing!

WARNING: This chapter is a flash back and it does contain some moments that may be too mature for younger eyes.

The Secret Agent Conundrum - Chapter 3: The Reason It Happened

Sheldon sits in Amy's lab waiting for her to finish her day so they can go on their planned date night. As Amy is working she realizes she made an awful mistake with one of her experiments.

"Oh no, oh no, oh no!", Amy cries from the adjoining room to her lab.

Sheldon hears hear cry from the other room and unthinkingly runs to see what is wrong with his girlfriend. "Amy, are you ok?"

"Sheldon, you don't need to be in here. I've made a horrible mistake with an experiment." She begins to sob. "I think that is has turned into something radioactive.", Sheldon could hear her say through her now steady sobs.

"Radioactive! I'm getting out of here!", he yells.

"It's too late, Sheldon, you've been exposed, as have I."

"Oh, God, why have you forsaken me, even though I doubt your existence?", Sheldon cries out.

Amy wonders what has come upon her and her boyfriend. "What have I done?", she thought. Her tears now quieting, but you can clearly see the worry on her face. Amy walks over and closes the door to the room. "We need to stay in here. This radioactivity can't be spread all over Pasadena."

"What about our date?", he asks.

"Our date will be spent in a radioactive lab, Sheldon."

"WHAT? NO! I can't believe this!"

"Sheldon, do you really want to go to The Cheesecake Factory and infect everyone in there, including your neighbor and my bestie? Because if Penny gets infected then Leonard will, unless you get to him first, which is a high possibility since you live with him. However, I don't want that happening.", she told him. "What am I going to do to decontaminate us? How will this affect us from now on?", she thought.

"That's a fair argument. I do not want Leonard and Penny to be contaminated, no matter how mundane and workaday they are."

"Come on, Sheldon. We need to decontaminate ourselves."

"Where? What? How?"

"In the decontamination unit through that door.", she said, "For a genius, you really are not thinking like one."

"HOW DARE YOU SAY THAT, AMY?"

"Well, it's true!"

"I hate to admit it, but she's right. I'm not telling her that though.", he thought. "Ok, how do we proceed?", he asks her.

"Come on." She grabbed his arm, although he was quite reluctant of her touch at first , and she led him through the door to the decontamination chamber. "Take off your clothing."

"WHAT?"

"Take off your clothing, Sheldon. They are contaminated and we need to dispose of them to decontaminate.", she replied.

"NO, NO, NO! We are not getting naked together!"

"Sheldon! We have to! It's the only way to decontaminate! Do you not get that?"

"I do not have a change of clothing, I can't dispose of them!"

"It sounds like you would agree to the decontamination shower?", she asked. He nodded his head yes and sighed. "What's the sigh for, Sheldon? Are you scared of what you might find out?", Amy said slighly.

"Um...um. It sounds to me as you are going to take this opportunity to try to have coitus with me and get decontaminated too. I don't like it! I don't like it at all!", he said.

"Ok, but we need to get decontaminated. What do you suggest?"

"I suggest we take our decontamination showers separately."

"I'm afraid that we can't do that, Sheldon. There are only enough decontamination agents for one shower and they highly recommend that these showers are not taken alone."

"WHAT? One shower? Oh, I'm so screwed!"

"Not if we shower together.", Amy said snarkily.

"Oh, ok. I see where your reasoning is and this is an emergency.", he said.

Sheldon and Amy begin to strip their contaminated clothing and put them in a bag that prevents anything else from being contaminated. All that they had left were their undergarments and Amy really thought those should be removed too.

"I think we should remove our undergarments too. We need full decontamination.", Amy said.

"NO! You've already got me into my underwear, what more could you want?"

"SHELDON! You know where I'm coming from here! This is not a time to dilly dally around. Do you want to walk in the outside world again or do you want to be trapped in this room forever?"

"Yes, I do. I just think that taking off our undergarments is going too far. My mother once said, 'Never let a girl see it unless you intend on spending the rest of your life with her.'" "Wow, I guess Mom wins.", he thought. He reaches for his underwear and drops them, revealing it all to Amy.

"Oh, my!", laughs Amy.

"What?"

"Nothing, nothing at all." Amy turns her head so she doesn't feel her sexual attraction to Sheldon. She knows that it will be hard to not show it, but then she thinks, "Oh. Come on! I'm his girlfriend! I'm supposed to sexually attracted to him!" She unsnaps her bra that hooks in the front and drops it in the bag with her other clothing. She hesitates for a moment and then drops her underwear and tosses them in the bag with the bra. She hesitantly turns around and lets her boyfriend see her naked for the first time.

"Um...um...um.", stuttered Sheldon.

"What's wrong Dr. C? Cat got your tongue?"

Sheldon is speechless and walks straight by Amy and to the decontamination shower.

Amy ponders what just happened and walks over to shower only to find a very different Sheldon.

A/N: YAY for Shamy! I had a few reviews ask me to reveal how they turned evil. Well, these next few chapters are just that, how they turned evil in a flash back! You'll see where I'm getting at, don't worry! And I fought and fought with Shelly all day to write this. It's been quite hard because I am quite adamant against Shamysex, however I reminded myself something, this is an AU fic and anything goes! I still can't believe I got them that close to it though. Oh, well. We will see what happens and them turning evil in the next few chapters. We will eventually get back to Raj and the gang! PROMISE! This has to be shown or it won't make sense!

PS – REVIEW PLEASE! I like reviews! I will try to update more often, but life gets in the way. So sad really that it's the truth. However, I will eventually finish this fic, I promise!