Ash, Cynthia and Candice walked out of the temple and out of breath. They made their way back to the Pokemon Center to rest for a while to recover from the near death experience. "That was way too close for comfort." Ash said as he sat down next to Cynthia. "Tell me about it." Cynthia said. "Now, we need to get the hell back up to Mt. Cornet and summon him with the Azure Flute now that we have the song." "I can teach you the required notes to play this song if you wish." Candice offered. Ash asked if he could learn it. "Alright Ash." She said. "This will be a little tricky, but I'm sure you can do it." Candice began teaching him how to play the flute and learn the notes needed. After a good 15 minutes of practicing, they both felt like he was ready to go. "Alright, before you go." Candice said. "Take this with you." She handed them a sheet of what notes represent what holes needed to cover while playing. After they their thanks and good byes, Ash and Cynthia mounted Garchomp and Salamence and took off towards Mt. Cornet.

By the time of their arrival, Team Galactic was already waiting for them. "Welcome back you scoundrels." One of them said. "We knew you would return to stop us, but now that Giratina is ours nothing will stop us for reaching our goals." "You guys are just as stubborn and reckless as last time." Ash said as he dismounted Salamence. "Cyrus is trying to create a new universe without spirit, meaning that everyone will be destroyed. That includes you." The grunts were laughing manically. "You fools." Commander Saturn said as he walked towards them from behind. "Whoever said he wanted to do that now? He now wishes to control this world and the Distortion World for himself. In order to do that, we needed Giratina's power to conquer both worlds." Cynthia pulled out two Poke Balls out of her pocket and walked towards them. "You must stop this now, or I will be force to stop this." Cynthia yelled. The grunts and the commanders laughed again. "You're too late my dear." Saturn said. "We have just begun to Conquer this world with Giratina's power. Nothing can stop his rise to power, not even the champion and her little squishy of a partner." He walked towards Ash and said. "You are nothing more than a mere sidekick." He said as he patted his head.

From that point, Cynthia began clenching her Poke Balls. "That's it." Cynthia growled. "If you want to pester him again, you'll have to go THROUGH ME FIRST!" She threw both of her balls and Milotic and Lucario burst out. Ash did the same but out came Eelektross and Mamoswine. "Let me deal with the Commanders Ash." Cynthia insisted. "You take care of those grunts." Ash and his Pokemon went towards the grunts, who have sent our their Pokemon to strike. "EELEKTROSS, USE THUNDERBOLT!" Ash shouted. "MAMOSWINE, YOU USE ICE BEAM!" Eelektross shot out a huge burst of electricity from its body and Mamoswine shot out a beam of snow and ice out of his snout and hit half of the grunts Pokemon. Several Golbats flew towards them and let out sludge bombs at the two, causing Eelektross to get poisoned. "Eelektross, are you okay?" Ash yelled. "Here, eat this Pecha Berry." He threw a pink peach-like berry towards it and Eelektross became healthy again. "Mamoswine, use frost breath on the Golbat." Ash said as he turned towards Mamoswine. "We got to take down those flying attackers." Mamoswine unleashed at blizzard-like breath out of its mouth and hit all of the Golbat's in the air, causing them to become frozen solid.

Meanwhile, Cynthia and the 2 commanders, Saturn and Mars, were fighting near the entrance of the Spear Pillar. "Lucario use aura sphere on Purugly, and Milotic, use hydro pump on Toxicroak." Cynthia said to her Pokemon. "Lucario jumped up and charged up a sphere of aura and shot it right at Purugly. "Purugly, counter it with shadow claw." Mars said. "Toxicroak, dodge and use poison jab." Saturn said. Both their Pokemon dodged and counter the attacks, and have done some damage to Lucario and Milotic. "We have been preparing to take you on ever since you last visit here." Saturn said with a smile. Cynthia was getting angrier by the minute. "Alright, then lets try this one." Cynthia said. "Lucario and Milotic, use the same moves but put them together." Both Pokemon shot out their attacks and the two attacks combined and hit both Toxicroak and Purugly. The combined attacks sent them flying and have collapsed onto the stone ground and fainted on the spot. "It's over, you're done." Cynthia said with a serious stare. Saturn and Mars chuckled after they returned their Pokemon into their Poke Balls. "You think that just because you defeated the Commanders that we have lost?" Mars asked. "Well you have another thing coming." "While we were distracting you and your friend there, Cyrus and the mercenary Wade Johnson have just finished creating a device that has the same powers of Giratina thanks to the Griseous Orb." Saturn explained. "What are you talking about?" Cynthia asked. "Are you deaf or something?" Mars asked. "Cyrus and Johnson were preparing the final step of their ultimate plan of world domination of both our world and the Distortion World."

At the end of the Spear Pillar, Cyrus and Wade just created the device to take Team Galactic to the Distortion World and take over it by force. "Well done Wade." Cyrus said with a smile. "You have served your purpose and have successfully help Team Galactic back to power. Here is your payment of $50,000." He tossed a bag containing the money he promised. "I have a little more for you if you hold off those midgets for as long as possible." Cyrus said as he presented a smaller bag of money. "How long do you want me to hold them here?" Wade asked. "If you can hold them here for about a half an hour, the reward is yours." Cyrus answered. "Deal." Wade said as he pulled out a Master Ball. "GIRATINA!" Cyrus shouted. A powerful roar erupted from behind the wall behind him. The giant Pokemon appeared above him. "To the Distortion World." Cyrus said as he mounted Giratina. "It's time we finish this once and for all." Giratina and Cyrus went through a giant portal Giratina created and disappeared from the human world.

Ash and Cynthia fought their way towards where Cyrus and Giratina disappeared at and stopped when they eyed Wade with his Pokemon on standby. "So, we meet again." Wade said. "Cyrus is gone to the Distortion World already. No body can stop him now for the only way to get in there is with the device we created from Giratina's power, or from Giratina itself." Ash and Cynthia approached him with their Pokemon ready to fight. "There's no point of fighting me." Wade said. "Your Pokemon are all worn out and used up most of their powers." "Maybe so, but we will fight together to take you down Wade." Ash said. "Besides, we have a score to settle with you from our last visit." "You can try." Wade said as he threw a Master Ball containing an Aggron. The Aggron had a bracelet on its arm containing a mega stone. "This battle will be like no other." Wade said. "This is the only Pokemon I need to stop you guys. You can use all of you Pokemon you want to take it down." "Bring it on you creep." Cynthia said. Both Ash adn Cynthia sent out their Pokemon that were exhausted from all of those battles. "Aggron,MEGA EVOLVE!" Wade shouted as he pressed a finger on the keystone on his bracelet. The energy within both stones combined and transformed Aggron into a gigantic Pokemon that gained a lot of weight. Both of Ash and Cynthia's team began attacking it with as much energy they had left, but none of them were strong enough to keep up. "It is futile, you have lost." Wade said. "Aggron, use stone edge." Aggron summoned sharp stones and sent them flying towards them. Suddenly, multiple attacks came from behind them and stop the stones from attacking them. What were these attacks? Find out in part 2.