He thought he was screaming, but he did not know, as he heard nothing, felt nothing but the pain, saw nothing but the blackness and as sudden as it has started, it ended, leaving him with a single whispered word: stay.

John and Carson are pulled into a world that tests their friendship...and their sanity. Shep whump / Beckett whump.

When John saves the day and is severely injured, he wonders if he should retire and return to Earth.

SUMMARY: Rodney has saved them many times using his brain, but this time it's his physical attributes that are needed. Shepwhump and teamwork abound.

New rewritten summary: After a mission goes sideways, its up to Rodney to find a way to help John heal. Adventure into the unknown ensues! As always, reviews are treasured :)

Stranded on desolate planet, broken and betrayed by those closest to him, John Sheppard struggles to survive. With their memories affected, his team try to remember what happened to him. Alone and hurt, John does everything he can to try and forget.

SG1 rescues Daniel after he's abducted and tortured for nearly a week. Daniel has trouble dealing. This is a prequel that concludes in my SPN/SG1 crossover, "A Very Supernatural and SG1 Christmas" (posted in 2012).

Sheppard, Teyla, Ronon and Rodney are trapped in a maze of deadly clues. Sheppard is injured and with time running out, Rodney must solve the ultimate puzzle - how to escape before John succumbs to poison and they are all trapped forever.

An entry in the Ancient database leads the Team to a facility with hoped-for Ancient tech...or is the technology more than they hoped for? Takes place S3, before Tao of Rodney. Team fic.

They had just moved in to their nice suburbia house when Oliver finally succumbed to the fact that he was sick. Felicity had been waiting for him to admit it and for him to finally crash. She didn't expect him to crash just as hard as he did though, but knowing Oliver she shouldn't have expected him to do anything the easy way.

Oliver prefers to be a little spoon. He likes feeling safe.

5.17. After being tortured by Chase, Oliver needs more help than he's willing to admit. That's what family is for.

This is an AU ending to the season five episode Inquisition. Let's just say that John is not a happy camper.

A creature's instinct to survive is strong; It's also about more than just escape. Set in S2E08 "Conversion": What else did Sheppard do during his time as an Iratus-Human hybrid? Lorne knows the truth and has to deal with the fall-out.. but he can't fix everything alone. [Sheppard, Lorne, OFC]

Kanaan is less than pleased with the relationship between Teyla and Lt. Colonel John Sheppard and decides to do something about it.

The events of "Serpent's Song" prompt Daniel to return to Egypt.

After Sheppard makes a surprising return after weeks missing, will the team be able to heal the apparent psychological damage? And why is he so attached to that tiny little kitten?

Sheppard is rescued apparently unharmed following his abduction by bloodthirsty space pirates...or so it seems. But what really happened during the six weeks he was missing? Some dark moments in this story. And Shep!Whump...naturally!

Rodney McKay was an ambitious man, but his ambitions were of the intellectual variety. He could care less about money as long as there were plenty of people around telling him he was the smartest guy in the room. He had that title neatly wrapped up (whenever Sam wasn't on base) until a certain John Sheppard sauntered into the Antarctic Base.

Matt Murdock learns to never accept a drink from a stranger. Written for a Daredevil Kink Meme prompt.

This story begings after Arrow 3x09, dealing with Oliver's Journey after what happens to him after 'The Climb'. And how Team Arrow will get him back, meaning there are two storylines that eventually become one.

Sheppard's in a cold dark place, literally. Rodney must guide John through a monster-infested tunnel before either broken ribs, killer cockroaches, or radiation kills him. Written for Sheppard H/C Winter Fic Exchange 2014 over on LiveJournal.

Oliver's PTSD and everyone's reactions/attempts to help woven through the first season. (This is canon compliant for through the end of season one.)

He should have just listened to John's constant complaints, came out of his lab for air once and awhile instead of waiting for Sheppard to drag him out kicking and screaming, that mistake was now going to haunt Rodney for the rest of his life. Inadvertently leaving Rodney in charge was a lapse in judgement that Sheppard and Rodney would take to the grave.

John gets in an accident and conflict ensues. John and Rodney both get whumped and its set during the time Elizabeth and Carson still inhabit Atlantis. NOW COMPLETE!

Set during the Season 4 ep "Serpent's Venom," Daniel is struggling with the build-up of loss in his life. Sarah Gardner was just taken by Osiris, very close to an anniversary Daniel is not looking forward to. The tension within SG-1 is getting to him. Perhaps there's a solution - a fairly easy solution - but it's going to take a heart-to-heart with his taciturn best friend.

They were quick to send Daniel away, to drug him, and restrain him behind padded walls. They called him schizophrenic. His sickness created by the Stargate, Daniel's greatest achievement. From diagnosis to hypothesis to treatment, there must have been so much more that went on behind the scenes. And surely Daniel's friends - his family - wouldn't abandon him so easily.

Major John Sheppard is having nightmares and second guessing his actions. Set right after season one, The Rising

John loses himself. Shep whump.

John struggles to recover emotionally after his terrible experiences on Earth. Anger and guilt are not allowing him to heal. Who can help him, if he can't help himself? This is a sequel to "Evil Intent." Please read that first, so you can understand "Aftermath." Thank you!

When John is convicted of killing an innocent he has more to face than hard time. Serious Shep whump, and major angst for the team as John is sent to the worst prison in the Pegasus galaxy. Set in season 5. Keller is there, but Carson is the main doc.

Pain is easy for John to hide. Other things are not. Written for the Sheppard hc summer 2011 fic exchange.

...a certain John Sheppard hit his head. Well, a tree hit his head. In a lightning storm a mile from the stargate. At night. Huddled in a cave with a very befuddled John, his team must figure out how to get him home.

Sheppard suffers an emotional trauma from the events of Phantoms.

Rodney and the team work to bring John home, then fight to bring him out of the darkness. Set post S5.

Cameron Mitchell has to take temporary command of Atlantis after Sheppard has an accident with an ancient device that reduces to him to the mental age of 3. This, is Cam's diary.

Prompt fic: Aftermath ficlet. John is back home after being held captive and tortured. Pure comfort, with the team finding their way around him.

Serving under the famous Lt. Col. John Sheppard isn't quite what new recruit, Alex Weiss, is expecting. When John takes a team of Marines to a boring little island in the middle of a typhoon things get really interesting.

'He'd let the exilaration of gliding on thermals lull him into believing he was invincible.' Wing!Shep whump/angst. Sequel to COCA. Enjoy! XD

Another day, another culture, another nightmare. Shep whump, Gen.

John Sheppard was an island fortress - strong, but distant. He did not invite others to cross the divide, but twice, she had reached for him...

Patient John Sheppard is dying in a psychiatric institute after a horrific accident, unable to separate himself from delusions of being a hero in the fabled city of Atlantis. One shot!

When Sheppard is rescued after becoming trapped on an alien planet, his team inadvertently bring home more than just an injured colleague. Shep Whump!

' "You tried to escape, John." Uh, no, lady. He really didn't. He'd been too caught up in struggling to die. Maybe that's what she meant.' Inquisition tag. Shep whump. John S/OC - see shepsgirl72's Deliverance trilogy and A/N. Warnings: torture/profanity. *grins whumpily*

COMPLETE! With the rest of the team coping with the aftermath of the last mission, John Sheppard finds it increasingly hard to stay grounded in reality. Sequel to The Consuming Darkness. Lots of Whump and angst. :

What makes a man? John and Carson each struggle with the question...only John’s life hangs in the balance.

*Mild SLASH*-Sheppard/Mitchell--Sequel to The Only One--Since meeting John, or more accurately meeting John’s parents, Cam had read more books on surviving abuse then anyone should ever have to read.

Missing scene to Need: what happened after Daniel broke down in the storage closet. Now up Ch2: Jack's POV

John is captured by a woman who wants him as her consort but when Shep refuses he's made her slave. Question is can rescue come before their friend is broken beyond repair? Serious Shep whump and team angst Set in Season 3 with Elizabeth and Carson.

Another short comment fic written for LJ. John's team rescues him, but he's a little confused and he's definitely not helping.

Missing scenes between parts 1 and 2 of Children of the Gods. How does Daniel Jackson fit back into life on Earth and in the SGC? What made Hammond change his mind about the archaeologist?

Comfort comes from an unexpected source when John is unknowingly hurt in a trip and fall accident. Spoilers: Season's 1-5, Rated T for mild language, Chapter 2 has a warning. Story complete, but will be posted in 2 parts.

John thought it was over, but when a new presidential advisor and an old enemy both show up on Atlantis, the wounds run deep. Set after Common Ground, so SPOILERS! Now COMPLETE!

Sheppard has to confront his worst fears when he fails to keep Rodney safe. Shep & McKay whump. COMPLETE.

Sanity is a fine line between the scars of the past and the belief in a hopeful future. But after a long captivity, John may no longer be capable of the balancing act. COMPLETE

When a prison sentence and an experiment rip John's memories from him, his team must help him find himself again. Spoilers through The Prodigal. Contains scenes of violence.

Accident statistics say ninety-two percent of avalanche victims survive if their party digs them out within fifteen minutes. After forty-five minutes, Rodney and the Team were still searching for Sheppard.

They had never expected to end up in a war zone. Sheppard is captured, but rescuing him is only the beginning, because Sheppard is badly hurt, the Gate is inaccessible, and enemies are everywhere. Written for the Sheppard hc Secret Santa on LJ.

On a world where Atlantis is a myth and the Wraith are childhood tales, Sheppard and team are captured for information. Surviving is only the beginning. Warning: contains scenes of torture Sheppard .

Maybe it was one too many burned out planets. Maybe it was one too many friends lost. Maybe it was shouldering responsilibity for so many taken by the Wraith. Even his closest friends are beginning to wonder if Sheppard is succumbing to the pressure.

After Remnants SGA 5x15 , John freaks out, just a little. Because this fandom needs more emo!John smarm.

There is no way, in my world, that John Sheppard suffered no repercussions in Remnants.

Team Sheppard travels to a new world to establish friendly trade but the natives have their eye on something that's not on the table. Set season 3 pre-Sunday as I'm too fond of Carson, with Elizabeth and a few OCs. Rated K , violence, cussing but NO sex!

Pursued by men who want to kill him, an injured Sheppard struggles to find his way back to his team.

When John’s team is captured, John is tortured for information. Things don’t get much easier, even after they escape. Written for the 2nd Annual Ficathon at ShepsAtlantis.

John Sheppard goes on a mission, but gets captured…whump and angst ensue.

Somewhere, within the depths of an injudicious city, darkness waits. Trouble is brewing and the fate of millions of people lies in the hands of a very unsuspecting colonel. Chaos has found him, now what will he do? Whump in abundance.

Set series 5. An accident causes John to lose his memory of the past three and a half years. How does a series 1 John fit in with a series 5 Atlantis? Teamfic with a Sheyla twist to it.

Colonel Sheppard is arrested offworld. Whump ensues...

Epilogue of a sort for Crystal Skull. A story about Daniel and his appendix.

Sheppard is captured and to be a slave to the wraith. It becomes more than a matter of survival, but also a matter of keeping his sanity.

He seeks warmth while inviting the darkness. Sheppard and Team Comfort. Written for FlashFic Freezing challenge.

John was right, the price paid was too high. John is hurt, but overcomes the challenge he faces. Shep Whump in the worst way.

Sheppard's condition takes a turn for the worst after 'Conversion'....LOTS of Shep whump... Dang, he just looks so good when he's whumped g NOW REWRITTEN!

They need only to survive the night. Ronon/Sheppard friendship.

Lorne makes a snap decision and does whatever he can to keep Sheppard alive. Written for the Secret Santa exchange on SheppardHC. Rated T for language and brief nudity.

A visit to a beautiful planet has disastrous consequences for John Sheppard. The team races to find out what's wrong with him, but the answers they seek may be buried deeper than they imagined. Shep whump. Minor spoilers for Common Ground.

Sheppard learns it is more about him than he could ever imagine. His gene is strongest for a reason, and he learns why. Shepcentric but team invovled, even O'Neill. Shep whump sprinkled through this adventure. Not a fairy tale! AU if that fits better

The team is captured by some acquaintances of Kolya, who just may have driven Sheppard over the edge in their attempt to find Atlantis.

Lost, hurt and alone, Daniel struggles to remember, struggles to stay alive.

COMPLETE Rodney returns to Atlantis after a long trip only to find more trouble back home. Guess who? Set before Sunday because this is fanfic and I can do that. Shep Whump in an interesting way...

Four went out, and three came back. Sheppard has vanished, and the rest of his team lies injured. As Sheppard and his team fight their own separate battles for hope and survival, the true danger may be different from what any of them expect

John is sent back to Earth to recover from his latest set of injuries and decides to visit his father. He is very surprised at the homecoming he receives.

How can Rodney heal someone who has been through something not even he can accept? It's a matter of pain, trust, assistance, rejection, forgiveness, and above all, kindness. It's probably slash. Rated very strong T to light M. Please read warnings.

Security protocols on an Ancient outpost separate the team, and an accident leaves Sheppard and McKay injured. Can they find each other and the way home? Spoilers through The Return with one tiny one for The Game.

What happens to Sheppard and after the events of Lifeline? This is my take on how he handles it. Lots of yummy Shep angst! No ship but friendship, and there's plenty to go around. Spoilers for Sunday, First Strike, and Lifeline.

Things are not going well for John Sheppard, and they are about to get infinitely worse. Minor whumpage and slight angst. What more could anyone ask for? Rated T for the occasional bad word, some of them in Czech.

Most Accidents happen in the home. They also happen to Daniel.

The team are captured and learn that there are two forms of torture, not knowing which one is worse. Lots of Team emotional whump—Shep whump.

The sequel, or continuation, of The White Room in which John and Rodney get into all kinds of trouble working as slaves and battling Kolya.

Summary: It was supposed to be simple so how did their mission end with a very drunk, whumped Colonel. The link for this seems to be a bit touchy so if it doesn't work you can find this over at my livejournal in my authors profile.

A close shave with death leaves John Sheppard searching for answers. Warning: Shep Whump!

All it took was a single fall to show how fragile and important their friendship was. Formerly from Gateways. Contains spoilers from season 1 and 2.

Sheppard seems to have lost his mind and no one can figure out why.

A recuperating Sheppard finds temporary sanctuary in a church. An outsider’s view on Colonel Sheppard and his team. Angst & Team friendship.

Sheppard halted them at the foot of the stairs. Elizabeth was between them, but he would only need to move his hand a couple of inches to aim the gun at either of the men.

Jack discovers some foundations aren't so easily repaired. Takes place after Shades of Gray This story was formerly from Gateways.

When Sheppard activates an Ancient device nothing seems wrong. But when people start getting hurt, the Atlantis team start to investigate. Will they realize what's wrong with Sheppard?

Jack is concerned that Daniel is endangering himself, and the team, and takes action, only to have it backfire. FINISHED

Daniel deals with guilt and grief.

Sheppard was slurring his words.. Oneshot Sheppard whump fic John Sheppard meets heavy duty painkillers. COMPLETE.

John is captured by aliens and experimented on. This is a creepy one.

After a difficult mission, John is feeling strange and having trouble coming to terms with what happened. Shep whump. NOT SLASH.

I'm cured, was what Daniel said and Machello's legacy comes to an end. But when a fractured team comes back together, Col. Jack O'Neill realizes nothing is truly over or truly cured. Happens after Legacy.

Cameron Mitchell spends a week in Atlantis, and learns a lot about his old buddy, John Sheppard.

Caution! The Pegasus Galaxy contains many dangers. Like football, giant space ostriches and sharp edges. Herein be Shep whumping. Gen. COMPLETE. First fic so concrit, feedback appreciated.

On a desolate alien planet, John Sheppard is lost in more ways than one.

Mysterious ghosts are appearing in Atlantis trying to harm its inhabitants. The race is on to solve the mystery and save Sheppard, McKay, Carson and others from murderous phantoms intend on taking lives. Many get whumped. COMPLETE

She’s mad as a hornet and isn’t going to take it anymore. Atlantis encounters a resident just waiting for Daddy to come home. Cowritten by Stealth Dragon and drufan. You know there’s gotta be whump!

Icon Tag. SG1 finally gets Daniel back.

Sheppard is captured by an unknown threat. Will his team find him in time? Warning: dark fic and Sheppard whumping! Rated T for now.

After being rescued from three months of torture, Sheppard must find his way home through himself and his friends. Oneshot. Complete.

A little Shep whumpy drabble involving needles. Written for the GW Shep Whump thread.

Sheppard is forced back to active service for two months. On returning to Atlantis is the strain proving too much?

There is no such this as a simple offworld mission when John Sheppard is involved. Poor Shep gets whumped again

Carson atones for past sins and Sheppard ends up paying the price. Radek wears the cloak of command…as well as his tuxedo, and Rodney end up with a gun pointed at him…yet again. SheppardMcKay friendship

Tag to The First Ones A tired and emotionally worn Daniel deals with the events from this ep. REPOSTED!

The fallout from the Arcturus project might be more complicated than it seemed to be at first. Episode tag to 2x06 Trinity. Complete

John Sheppard's ordeal is finally over. Or is it? Common Ground episode tag, so beware of major spoilers.

Her heart was in her mouth as they carried him through the gate.. A rather dark Shep whumpy fic. Written for the Sheppard HC LJ Addiction challenge. WARNINGS FOR REFERENCES TO TORTURE AND DRUG ABUSE

After enduring terrible torture, Sheppard becomes obsessed with a coloring book, and Rodney doesn't get it. Friendship story. NOT SLASH!

When a simple mission ends horrifically, Sheppard is traumatised and left struggling to cope. [3906 Rating changed to T thanks, Emrys1]

Sheppard is back on Atlantis after going missing for two weeks but he doesn't have a clue about what happened. Carson Beckett, Rodney McKay and Kate Heightmeyer try to solve the mystery and in the process uncover a plot that could kill them all.

Written for the Sheppard HC challenge 2, sensory loss. An accident off world causes Sheppard to temporarily lose his hearing. Humor fic.

John hates it, doesn't even know it's happening to him, but pity is what's going to save his life. Shep whump. Team angst, better summary inside.

Sheppard's team is stuck on a tropical planet, and it's getting awfully hot...then it gets worse.

There is always a price for pride. You know that includes whumpage and everyone's invited. Rated for violence, language and mature themes.

Request fic for Kodiak Bear Country feat. Sheppy in restraints. Shep whumpage galore. Now complete.

Written for the Sheppard HC LJ Fever challenge. Sheppard has a fever.. a short fic composed of short chapterettes, each from a different POV. Now complete.

Captured, implanted with Wraith trackers, released to run and die ... such is Sheppard and McKay's fate. Now all they have to do is find each other before the Wraith find them. And Sheppard has this pesky little amnesia problem... Complete.

After a mysterious head injury, John struggles to rediscover his place within Atlantis, unaware that the city itself may hold the key to regaining what he lost. Warning: Rated T for some rough language. John's POV. Complete

How far is John willing to go to protect? Heads going snickersnack, and genetic impossibilities. Oh, and don't forget the terrible physical trauma. John's not a happy man.

In this tag to The Long Goodbye, Thalan hangs around long enough to wear out his welcome with everyone, especially John. The first story coauthored by Merlin71 and Titan5.

Sheppard gets an unexpected reminder of his experience with the iratus bug, followed by a hairy encounter with yet another creature from the Pegasus Galaxy.

McKay and Sheppard discover a well on an Ancient outpost with unusual results. COMPLETE Mostly John, Rodney and OC, but the gang's all there. May containg spoilers for seasons one and two. My first fanfic ever. Please review & tell me what you think.

The events of The Siege and Runner catch up to Sheppard. Will his friends be able to help him? Spoilers for season two!

Sheppard is the subject of an unauthorized experiment and he isn't having much fun. A little ShepWeir in places. McKayShep friendship stuff as usual.

When McKay gets Sheppard to turn on an Ancient device, something goes horribly wrong. Some comfort, humor, and friendships.

John continues with his recovery. Is he making progress? Where's the crew and what do they think?

As Daniel struggles to cope with his ordeal, Jack and Janet begin to suspect something more might be troubling him.

My version of events after Evolution, Pt 1. Whumped Daniel/Awesome Jack. Action/Adventure, Drama, Angst, H/C

Daniel gets a new neighbour who seems and finds him very familiar. Complete

A missing scene from the episode The Light Various POV.