Sheppard is rescued apparently unharmed following his abduction by bloodthirsty space pirates...or so it seems. But what really happened during the six weeks he was missing? Some dark moments in this story. And Shep!Whump...naturally!

When Sheppard gets bad news he and Ronon return to Earth once more, mishap and adventure ensue as usual. This is a continuation of my story Things that go bump in the night but I have aimed to make it a stand-alone as well. Slight AU, lots of Whump later

Sheppard once more faces his nemesis in a battle to outwit and out class her and keep the timeline on track. Sarayah, of course, has other plans - plans that could change both past and future alike! Shep Whump (of course) and trouble for all the team.

Team Sheppard returns from a search & rescue mission with one of their own fighting for his life. But at least the rescue was a success. Or was it? Follows on from 'The Guardian'

John is somehow infected with a horrible sickness, leading him closer to death each day. Story over for now. Be watching my page for a new Stargate: Atlantis story that will at least have a preview out by the end of this year!

A routine mission uncovers a horrifying secret and leads the team to a mysterious planet, a military coup, and an Ancient mystery.

Sometimes it's the little choices that make the big differences. Sheppard's friends and family try to save him, in their own ways, for their own reasons... Written for the LJ SheppardHC Secret Santa Exchange. Complete!

When a routine mission goes wrong, John and his team find out that sometimes in the wilds of the Pegasus galaxy, you're not always on the top of the food chain. Written for LJ GenFicAThon 2012. Team Gen Story.

The prompt was: write some Sheppard weather whump and this just poppend into my mind. It turned out to be the longest story I ever wrote in English.

A perfectly-random collection of one-shots about Sheppard getting whumped. The more twisted half of my brain decided to show up and torture my poor Fly-boy, in various and assorted ways. Reviews are SO welcome! 2 *New* Chapters!

What do you get if you cross an experimental Stargate with a mad Medulsan? Big trouble for Major John Sheppard, that's what.Shep whump a-plenty, plus some action and adventure thrown in for good measure.

An explosion rocks Atlantis with Sheppard caught in the middle, but that's only the beginning of his day-off from hell. Something is loose in the city, and it's using the residents to reach its goal: total domination. Shepwhump fest, Sheyla - NOW COMPLETE

In the aftermath of a mission gone horribly wrong, Teyla discovers that all is not as it seems, leaving her to wrestle with what is real and what is not as Atlantis grieves for one of its own. Please read warnings.

The SGA-1 team is investigating an promising energy source. But there is an obstacle in the way and John falls victim to one hungry limb. Lots of Shep whump.

Sheppard's team responds to a request by an ally world and quickly discovers that there's more going on than unusual technology scaring local shopkeepers. When John goes missing, it's up to Sam Carter and the rest to get him home safely. COMPLETE

Sheppard and his team are sent to a legendary Ancient City with the aim of tracking down a ZPM or two, but when they meet the locals, things go to hell: literally. Team-fic with added Shep-whump, No pairings - Now Complete

A peaceful mission turns into a fight for survival because of the most unlikely reason. Shep whump!

*Complete* John Sheppard falls deathly ill while on an away mission. With a malfunctioning PuddleJumper and a StarGate that no longer works, the team are in a race against time to save their friend.

When injured during a mission, Sheppard discovers it's a long haul back to Atlantis. And that's only the beginning of his journey.

What happened after the credits rolled at the end of Vegas? Who did Detective Sheppard want to be and who did he become? Did he even live? This is a Gen/Friendship fic and it's complete for now...

"He never slept with Dr. M. Rodney McKay. He put it off." McKay/Sheppard

Detective John Sheppard faces hurdle after hurdle to catch the Wraith before it kills again.

When Sheppard falls ill, the road to recovery takes a different turn than anyone could ever imagine. Sequel to 'REUNION' Shep whump, but I also share the pain with Carson, Rodney and Dave. Hope you enjoy the ride.

Alternate ending to Irresponsible. Sheppard gets shot. Written for GateWorld's Shep Whump Challenge. Warnings: language, Shep whump.

Written in response to a challenge on the GW Whump thread. Missing scene/rewrite from 38 Minutes.

The Atlantis team find themselves trapped in an underground world full of hostile people and creatures. Shep whump. COMPLETE.

Sometimes things go really wrong before they go right. Another simple mission turned complicated. Shep and McKay whump.

Sheppard has been missing for nearly a week,held prisoner in a remote jungle. It comes to everyone's surprise when he comes stumbling through the stargate with a companion in tow, a very furry companion. shep whump AU in some ways,but the basicsarethesame

A series of unfortunate events occurs when a curse is sent via the ancient Trochlor lines. A Wraith story. Some Team Whump. Shep Whump. And even some Todd Whump.

Two members of the Atlantis Expedition are exhibiting bizarre behavior. When one of them is gravely injured, Atlantis is the only hope for rescue.

An assasination attempt leaves John injured and his team determined to find the would-be killer.

John wakes up in the middle of the night with a tummy ache. Shep Whump ensues...

"As death looms closer, I am content with the fact that I lost this battle. For I fought this fight like many others I fought as a soldier…" A Character Study of John Sheppard, In Verse.

Rodney and the team work to bring John home, then fight to bring him out of the darkness. Set post S5.

A test of courage to free a child sets John on an unwilling journey, where he has to find his past not only to escape oppression, but also to survive. Shep whump and team angst, with my favourite doc Carson

Sheppard and his team find themselves trapped and separated on a planet hiding a secret behind the walls of its great cities – one that has to be revealed to save the subclasses living there from a terrible fate. Shep Whump ahead!

"He did not want to die in the snow. He did not want his friends to die in the snow either." Written for the Shep H-cLJ Secret Santa 2010 for sgafan. Gen. Team. Spoilers up to 5.03 Broken Ties. 9,700 words.

John Sheppard loses his ability to control Ancient technology leaving his job, and his life, in jeopardy. It's up to his Atlantis family to figure out what went wrong and fix it. Shepp/McKay whumpage.

An old ally may have stumbled on an important discovery in the Milky Way galaxy and requests John Sheppard's help, but things are never what they seem.

While on a mysterious planet, John and his team fall down a deep shaft and are separated. All have different injuries and air will run out in a few days. What will happen now? - Mostly John & Rodney whump - some Teyla and Ronon Whump

Serving under the famous Lt. Col. John Sheppard isn't quite what new recruit, Alex Weiss, is expecting. When John takes a team of Marines to a boring little island in the middle of a typhoon things get really interesting.

Sheppard's POV - the team accidentally trespasses on sacred ground and Sheppard must face the punishment to save his team. Shep whump, of course.

A search and rescue mission leads to an unexpected discovery. Team fic with appearances by season 5 cast and a side order of Shep whumpiness. Guardians - the 2nd story in this universe - is now available.

Just before Christmas a tragedy strikes threatening to tear Sheppard's team apart, and rob Atlantis of it's Military CO. Has John's luck finally ran out this time? Sequel to "Sins of the father" with Shep whump, team angst, and my favourite doc, Beckett.

Sheppard wakes up hurt after an explosion and wonders if his friends even made it and who was doing this to them.

*COMPLETE* A quick flight to an allied world leaves John and Rodney stranded far from home with little hope of return and time is running out...

Sheppard takes a restless Colonel Caldwell on an easy diplomatic mission off-world. However, the easy mission becomes a matter of life and death as the two colonels are kidnapped and Sheppard is gravely injured.

If Shep didn't have bad luck, he would have no luck at all. Atlantis had developed a defence against the Wraith. Just a pity it couldn't help John when he got a visit from Kolya's brother. Sequel to 'Retribution' Shep whump, Ronon too with all the team.

A trade deal goes wrong and there are consequences for the Atlanteans. Everyone gets whumped, but mostly Sheppard. COMPLETE!

COMPLETE! With the rest of the team coping with the aftermath of the last mission, John Sheppard finds it increasingly hard to stay grounded in reality. Sequel to The Consuming Darkness. Lots of Whump and angst. :

Oneshot. Set right after the battle at the end of Transformers: Revenge of the Fallen. Two exhausted people find each other in the aftermath of a desperate Autobot-Decepticon conflict. Would one embrace mean that much? Mikaela & Lennox.

Leave no man behind" was John's Oath, but how far would he go to rescue a friend? Serious Shep whump, some whump for Ronon too with team and Carson angst and friendship. Now complete

John and Elizabeth are trapped in a cave-in after an earthquake. Their team tries to save them before it's too late. Gratuitous Shep Whump.

Sheppard races against the clock to save his friend, McKay

ONE SHOT. Will reminisces what happened to Sam and how he felt. Spoilers for ROTF. Will/Sam Slash.

Spoilers for RotF! Sam and Lennox talk on the way home. Friendship

SPOILERS TO REVENGE OF THE FALLEN.... Look inside to see what exactly happens. Don't want to spoil it for those who don't want to know yet. Mikaela/Sam and a hint of Sam/Bumblebee.

When Sheppard takes on the plight of the downtrodden men of Medulsa, he gets more trouble than he bargained for. Shep whump prevails! Set late Season 1 so spoilers for any episodes up to and including 'Sanctuary'. Complete - updates every couple of days.

It's a brisk sunny day in the snow. What could possibly happen? *Warning:* There be Shep Whump here! Rated K for now.

Accident statistics say ninety-two percent of avalanche victims survive if their party digs them out within fifteen minutes. After forty-five minutes, Rodney and the Team were still searching for Sheppard.

This is a short missing scene for Vegas. Beware - spoilers!

Episode tag to "38 Minutes." I know, I know - I'm like five years late on this...

They are always escaping death, but Sheppard's newest close call will leave invisible wounds on them all. Team fic. H/C. Drama

Rodney should have picked up on the danger when the welcome committee of one greeted them. Team Fic. Written for the flashfic 'comfort challenge'.

A visit to a beautiful planet has disastrous consequences for John Sheppard. The team races to find out what's wrong with him, but the answers they seek may be buried deeper than they imagined. Shep whump. Minor spoilers for Common Ground.

Written for the 2007 Sheppard hc Secret Santa. Tensions run high between Ronon and Rodney. A mission meant to give them time to work it out. But things never go the way they are supposed to and now Sheppard’s life is in their hands.

It's hardest on the ones who are left behind. One shot. Deathfic.

AU Shepwhumpy tag fic to Season 4 episode Doppelganger. WARNING! SPOILERS FOR PLOT OF DOPPELGANGER! My take on what might have happened if a certain scene had ended differently.. NOW COMPLETE.

The title says it all, folks. Shep Whump!

An accident teaches Ronon more than one valuable lesson. Ronon and SheppardFriendship

When Sheppard and his team go offworld, things don’t go to plan and Sheppard gets beaten, tied to tree and nearly killed by his teammates.

What happens when the hypochondriac isn't pretending? WARNING SPOILERS FOR THE LAST HALF OF SEASON 3. ESPECIALLY 3X17 AND 3X19!

Is Sheppard doomed to die, over and over again for all time? Or can he solve the puzzle of the cursed planet before another bullet takes him...

Danny gets shot while chasing a man lifting chips

A bounty hunter caused problems for our team during a routine trade negotiation. Set late season three. Now COMPLETE....

On a simple mission, the team finds trouble looming when an ancient with a hidden past crosses their path.Now COMPLETE

Vacations usually don't involve attacks by space pirates, emergency crash landings, wild fires, and saving the day when you're already injured.

Mysterious ghosts are appearing in Atlantis trying to harm its inhabitants. The race is on to solve the mystery and save Sheppard, McKay, Carson and others from murderous phantoms intend on taking lives. Many get whumped. COMPLETE

When Danny gets shot, Ed finds himself making some ground rules a little too late in the game. COMPLETE

JohnRonon friendship story. John is experiencing a new kind of deterioration, and Ronon seems to know something the others don't. It's kind of a long read, so take your time with it.

An explosion in one of the labs leads to Shep whumpage galore... No ships other than friendships. Chapter 11 now up!

Because he's much more fun than Sheppard. : Let's see what trouble our favourite scientist manages to get himself into, even without the flu! Complete!

A simple mission ends in disaster for a certain Lt. Colonel. Who'd have thought ladders could be so dangerous? COMPLETE.

I think the pressure's finally getting to John. Paranoia, dolphins, horses, alien otters and a lot of something for you Shepwhumpaholics. Funny, but it ain't that funny.

Sheppard has stomach trouble. Read it, i cant say anymore than that. It has somewhat expanded due to great demand!COMPLETE!

A trip to a world seeking a potential ally, turns into a dangerous situation for the team. [COMPLETE]

One version of what might have happened on the trip home following The Defiant One.

What started as a routine exploration of Atlantis, turns into a life or death situation when two team members are trapped in a remote part of the city. COMPLETE

After losing the most important person in her life can Mary pick up the pieces? Can the rest of the gang at the Monticeto handle the loss with a madman on the lose?

COMPLETE! After a trading mission gone awry, two of Atlantis’s finest are held captive. Twist. I suck at summaries. WeirShep shipperness, plus a lot of angst and character whumping.