In Washington DC, John Sheppard is a homicide detective. Elizabeth Weir is a coroner. When they begin investigating a string of related murders, secrets unravel and more could be at stake than their hidden relationship ... AU Sparky.

High-school drop out, Rodney 'Rod-man' McKay, joined the armed forces. Not over-confidant in his skills and slightly fitter than a normal McKay, what happens when he's assigned to go to Atlantis?

The Wraiths construct a deadly super-hive, Teyla disappears, Atlantis is in danger. Takes place after 3X02, the happenings are AU. Pairings: McKay/Sheppard, Caldwell/Weir, Michael/Teyla/Ronon Warnings: violence, mild slash

John and Teyla struggle to repair their friendship when Teyla disobeys orders on a mission. Set in AU of Season 4 from Missing. Warning: Whump, Sexual content

What if Sheppard was the one ending up in the machine in Tao of McKay? What if he ascends but can't stop helping the people of Atlantis? This is the story of his punishment. SGABigBang2008, McShep, Slash not graphic, Warnings: non-graph. PLETE

Sheppard/McKay AU John never had a family. He was military, raised from birth knowing what his future held. He was destined protect and sleep with some genius scientist for his country. What he never expected was to love and be loved. SLASH

AU from The Ark Rodney has found a new Ancient device on Atlantis, something goes horribly wrong. Just a normal day in Atlantis. RononOC mainly, with a side of JohnTeyla and Radek OC. Carson, he lives!

AU of Phantoms. What if Sheppard's aim had been better when he shot McKay? On the run from his own people and totally alone, will he find forgiveness from himself and his friends or fall into darkness? Shepwhump as standard.

AU: John Sheppard smiled, knowing that from that moment on, his life would never be the same. John/Teyla

"The plan had failed. John didn't know how, but somehow it'd failed. Instead of taking the Asurans with their pants down, the Replicator humanoids had stood ready. ... It'd been a massacre." AU from "Be All My Sins Remember'd", 4x11. Apoca!fic

John and Ronan are college roommates, who have just moved into a new dorm for their last year. And John has a crush on their neighbor, who tends to wear a lot of red. Oneshot, completely AU, slight crack!fic.

What if there had been a narrow margin of opportunity for Elizabeth to have been "rescued" by the IOA for their own nefarious purposes? Rated for future content. First jaunt into SGA fandom, so please be kind. Now open to anonymous reviews.

Arizona 1874: John Sheppard drifted from frontier town to frontier town seeking a new life. In Wickenburg, AZ he may have found his last chance. AU Cowboy!Shep

Obviously this is an AU. To summarize, they're already in their late twenties coping with changing relationships and solving past issues. Ronon/Keller, John/Teyla, Rodney/Vega, Lorne/cadman & Mike/Elizabeth.

Nine years ago, the Atlantis Expedition disappeared, leaving behind two of their number. What happens when suddenly, they appear, and nothing is the same as it was before. What happened to them? What happened to Earth? What happened to Sam and Torren?

-AU, Part 2 of series- As their second year in Atlantis begins, Elizabeth finds herself drawn ever further into the mystery of the Phantom of Atlantis, while John finds himself constantly torn between what he has become and what he wishes to be...

Set after the events of "Finding My Way" in AU of Season 5, John and Teyla are expecting their first child together, but Pegasus isn't finished with them. Will they be able to face what's coming? Will their relationship survive? Warnings: Violence, Sexual content. Pairings: John/Teyla, Ronon/Keller/OC

"It's three weeks before she finally realizes that she has yet to cry."

McKay is drawn into another dimension, crueler than his own. He has to find a way back home. Please read the A/N!

This is an AU where the Atlantis Expedition is allied with the Asurans. This is my 1st story. It's a SGA/SG1/SGU crossover. Forgive me if my OC seems overpowered. He is similar to Khalek and Adria, as he is a near-ascended being and has Ancient DNA.

Carters getting married and John wants to see Elizabeth in a white dress only problem is there's one condition - that he proposes. Slightly AU. Sheppard/Weir and Jack/Sam

When a unexpected double appears on Atlantis what is it going to take for the team to send him home? And how could his presence change the life of one Rodney McKay forever?

Rodney McKay risks his career, his life, and his city to save the woman he loves from a deadly virus. Alternate Universe of "The Seed." Sequel to "Aftermath." Established McKeller. EPILOGUE now up.

A more dramatic ending to "The Long Goodbye" episode with greater focus on the "he cares for you more than you know" line. It's my AU-take on how Teyla and John were affected by that revelation. This multi-chapter story, written for the 2012 Spring Fling "You Complete Me" SGA Beya challenge, is self-contained but it does directly follow my "More Than You Know" story.

AU: Jennifer exited her cab, she was so lost in thought that when she had all her bags out of the cab and was about to walk forward, she took one step and ran right into someone.