Neglected for his twin sister, Naruto ran away from his family and the village that has only brought him pain. He left the Elemental Nations entirely, finding a new land, and a new home. But when disaster strikes, he will be forced to return to the last place he wanted to see again. How will Naruto handle being a Prototype in a land of ninjas? M for gore and paranoia. Grey Naruto!

What would happen, if Sarutobi was a coniving old man, and not the kind grandfather figure we all know, if Orochimaru had other reasons for sealing away the kyuubi's power, set during the Preliminaries

Rikudo Sennin is visted by Kami,Yami,Shinigami and is told of what can happen in the future when he says his final death wish. he will become their herald, A third Prototype will come to e KyuKages will be born to either save or destroy the world alongside with the chosen one. Grey,strong,badass Naruto,hina,Ino some what like RTN. Bashing of charaters. Naruto/Harem

He was thrown into a passage of nothingness... And in time, he was thrown into a world beyond his grasp... How would he strive to live in this new world? Read as Alex fell into the world filled with corruption and hatred... Will he bring chaos to the realm? Re-write of Prototype X Naruto. Pairings undecided. FemNaruto.

Naruto carries Blacklight, James Heller and Alex Mercer teach him its ways, and he goes through his shinobi life learning to understand this power inside him that is eternally evolving. NaruHarem

When a small slip up by Kushina during the sealing of the Kyuubi no Kurama into Naruto happens and Kurama manages to pierce and kill the baby with his claw, a strange black and red strand revives Naruto. Follow Naruto as he goes through his life as the new Prototype. AU. Smarter, stronger, and logical-er Naruto. Noticeable differences. NaruHarem. Rated M (you'll find out why.)

Fear. Fear is what you feel when you stare at the unknown. Fear is what they felt when they looked upon him. He too knew what fear was like. He felt fear the day he had made the discovery that twisted and shaped him into what he was today. He felt that fear when what he discovered infected him. He fears very little now, for he is the Third Prototype. Warning: gore & death included

Naruto's parents are alive and he has a twin sister. He's treated like dirt and she's treated like a hero. He decides to run away and in the process he meets Alex Mercer. (Planing a rewrite, look on bio for update announcement)

After a jutsu gone horribly wrong due to Madara, Naruto became the new Shinju. As Naruto became bored, he then open a portal and go to another adventure IN ANOTHER UNIVERSE/DIMENSION. Watch as Naruto travel through worlds and find out all they have to offer. Godly/Dark/Demented Naruto. Naruto will be in Naruko form quite a lot of time in this story!

Every Event Happens For A Reason... Some, For Good... Some For Vile Purposes... But No One Expected What Was About To Happen. Semi-Dark/Intelligent/Kami Naruto Pairing Is Currently Not Set, Various Parties Are Vying For The Position. Recommendations Would Be Helpful.

Naruto is taken at birth by Orochimaru and is injected 'BlackLight' a new virus that Orochimaru made. The virus has killed everyone else who has been injected with it so Orochimaru knew only Naruto would be able to survive. Naruto is later chained up after he goes wild after he absorbs the origin or the wielder of 'Redlight' creating an even more powerful ninja. Powerful/harem/Gore

After being banished from failing the retrieval mission, Naruto finds himself sailing off beyond the Elemental Nations, a month later him and the crew discover a ruined city, he volunteers to scout ahead and comes in contact with a strange black substance. Godlike Naruto, Blood & Gore, Slight Resident Evil. Discontinued.

Bursting through the dimension black hole. Alex was thrown into the unknown world. Watch as he bring nightmare or will he? No yaoi. Over powered Alex Mercer. Start from Kyuubi attack. Rated M for language and some inappropriate scene. [Discontinued]

OC, AU. After a summoning jutsu goes wrong, a pupil of Naruto Uzumaki finds himself in new world with new foes. Now hounded by both Monsters and Men alike, Danro Senju finds himself protecting one his countries greatest treasures: the Rinnegan. No Pairings

After Naruto gets cornered by a mob, Naruto awakens a new bloodline, which allows him to absorb the biomass of a person, and consumes the Anbu responsible. Panicked, Naruto flees only to discover that with these abilities he could become a powerful ninja. Adopted from Halo12094. Originally named NaruTo!

Alex J. Mercer was inexplicably bored with his life. He had been alive for far too long with far too little to do, even in this new world he ended up in after the nuke. So saving a little kids life from death wasn't what he had in mind, but giving him the Blacklight Virus definitely would give him something to do for the unforeseeable future. More so since the kid was a jinchuuriki

Naruto is the descendent of both Alex Mercer and James Heller, though the use of a rediscovered REDLIGHT Naruto's two Mercer strands of BLACKLIGHT awoke. Now armed with a the power of the virus he will rise up and show the world the power of the Virus

ONE-SHOT. Tsunade's life changed years earlier when she and her apprentice met a monster name Alex. Over years his involvment in her life changed her view of the world and the people in it, he of course didn't intend to cause such a change. When Jiraiya and Naruto arrive the Slug Sannin is already prepared to take the position of Godaime Hokage. Idea that wouldn't go away.

in this story naruto is rejected by his parents. after getting beaten up by a mob he is saved by alex mercer. 1st chapter is up

Then Naruto uses his new found power to raise whirlpool country and it reborn.Naruto Harem.Reunite with family.Super powered Naruto family,Revenge time.Everyone Bashing,especially Sasuke and Sakura

Naruto has more than one thing sealed inside of him. Not only the Nine-tailed Fox, but also Alex Mercer.

Naruto neglected by his family leaves one night and meets Alex Mercer. Alex makes Naruto his surgate brother and trains and gives him his strand of the virus and becomes his teacher. Let's see what happens next. Not Yaoi

A take on Naruto with an emotionless attitude and Prototype powers. My reason is because in all Prototype games/comics, the main character always gets emotional. Naruto pairings is no longer decided by reviews. BASHING FOR PLENTY OF CANON CHARACTERS. Also, the Kyuubi attack occurred 15 years ago to clarify. I made a mistake with the time skips. SORRY!

After centuries of watch the world go by Alex Mercer is dying. Wanting to leave a part of himself behind he searches for someone to carry his legacy. What will this change when that person turns out to be our favorite blond ninja, Naruto Uzimaki?

The Rehash of BLN and BLN:R. Naruto Uzumaki died at a young age. But, luckily for him, he had Alex Mercer sealed in his gut along with the Kyuubi. What follows are the chronicles of The Evolutionary Shinobi of Konoha, and his path to greatness! Naru/harem-no real limit.