Revised....

-Authors Notes-
I'm sorry if you think I'm an ass for stealing other's ideas. I'm not using their story, but their idea for my own story. I wish to focus more on things than other authors tend to. I want to reach the depths that other authors don't take the time to. I am adding my ideas onto theirs. I am adding layers onto a good idea. They should be honored that someone wants to use their idea. I'm going to give them credit, if I use their idea.

Disclaimer: Eva is MY bitch,......when pigs fly, or I become a multi gillinare. I am don't care which happens, I want Eva. I also want to construct Rei into flesh and make her my wife, but I think I'd need Gendo's help....

-Author POV-
Alright...I hope I can finish this chapter too, and make two chapters in only a few hours. Thank god for my fast typing. I will probably only get half this done, before I have to go and bath my dog.... I sigh. I must now continue the Scenario A of Project-E (not Evangelion in this case, but Elaboration.)
"Now it is time to enact the Scenario. You may begin."
-End POV-

Complicated Feelings
Chapter 2- The Conspiracy of Red Spheres

Shinji missed Misato. He had not yet see her. He wished he could, but he had to wait for Rei to return with contacts. She was so caring of him. Misato showed she cared. Shinji wouldn't ever have her though, he is only a child, what could Misato possibly see in him? Besides, she loves Kaji. Nobody wanted Shinji as their love, but he loved many. His heart couldn't make up its mind. The beautiful ethereal Rei, the fiery Asuka, and the sexy Misato. They all were in his heart.

Ristuko finished her test on Shinji. The results were astounding, but made sense. Shinji had essentially came out somewhat like an Angel in human flesh. He was like Rei. He had angel blood in his veins. She had to report this securely to Gendo.
Rei came through the door of the infirmary and went into Shinji's room. She found Doctor Akagi, looking over the data she received and writing on her clipboard. She went over to Shinji, whose gaze was already locked on her. She felt her body rise in temperature when she realized this. She looked into his eyes. It was still unreal. His eyes still showed the deepness it always had. It wasn't his eyes themselves, but him, that made his eyes look they way they do. Shinji would always be Shinji. Doctor Akagi spoke.

"Rei, Shinji is now, partly angel, he now it similar to you."

Shinji looked at Rei, and at the mirror that Ritsuko had provided for him to look at. It made sense, he kind of have always known Rei was different. But Rei was like one of those....creatures? No, she wasn't. She was different. There is no way she could be a monster like them. It was his father who probably did some sick experiment, but I guess that is one thing I won't wish he did not do, because then Rei might not be here now.

Rei tried to contain her uneasiness to how Shinji would respond to that bit of information. She was unconsciously holding her breath. She released it when Shinji looked at her and gave her a smile that only he gave her. Rei had to resist melting under it. Shinji could tell that Rei was nervous about his opinion, so he had smiled to reassure her. He didn't know why she would care about him. Maybe it was his imagination.

"Don't worry Rei... I don't think you are like those monsters that we fight. You are to sweet and beautiful to be like that."

Rei suddenly inhaled in a gasp. He... accepted her any way? Even though she was similar to those beasts that tried to kill Shinji-kun?

Shinji is.... to kind. Rei thought. A tear rolled down her check.

Shinji reached up wiped it off her cheek. She smiled wonderfully at him, the biggest smile he had seen.

"These are yours Shinji." Rei handed him the cases that contained his contacts. I then took a little while for Shinji to figure out how to put them on. He then looked in the mirror he had. It looked fake to him, he looked at Doctor Akagi. She nodded in approval, he looked at Rei, and she nodded as well, but she could tell they were fake. But why did she seem to know Ikari-kun's eyes so well? She didn't know. She could just tell, but she gave him approval anyway, so he would feel good. He smiled at her for her approval. She blushed a bit, and turned her lips upward a little.

Doctor Ritsuko watched this interaction, but none of them seemed to notice. Dr. Akagi felt like she was going to vomit, but found this little affair amusing just for the fact that it would irritate the commander. They seem to have grown to like each other. I bet the commander would love to hear about this. Then she thought on the other side. She wouldn't want to be separated from her love. She imagined being separated from Gendo. Well, if they were truly in a relationship. She'd be devastated. She had the urge to see him now. She got up, and walked out, she would show him more than just his report.

Shinji and Rei barely noticed, Rei was sitting next to Shinji's bed, and Shinji laying down facing the window, them both enjoying each other's quiet company.

Misato called NERV, she was informed that Shinji had awakened, she would go there immediately. They wouldn't let her in before, for a short amount of time, she shrugged it off. She would get to see Shinji again; maybe he could even come home. She missed him.

When she got there, there was a NERV officer standing there, he saluted her, and said Shinji was ready to be taken home. He then left. She walked in and found Rei sitting next to Shinji. It was cute. She did slightly feel bothered by it, but she didn't know why. She then resumed entering the room. Shinji and Rei were aware of Misato's entrance, due to her heels she always wore around NERV. Misato sat on the other side of Shinji, blocking his vision of the simulated GeoFront environment. He looked up.
"Misato"
"Shinji."

Misato put her hand on Shinji's. Shinji had the normal urge to pull away, but he ignored it. Rei blushed a bit. She thought maybe that she should leave them alone. Then she though maybe she didn't. She didn't want to leave them alone for some reason. A feeling she did not quite understand yet told her not leave them alone. Misato smiled at Shinji and kissed him on the cheek. Shinji blushed...this was different from the normal kiss on the forehead.
"Rei, could you leave us alone."

Rei's eye twitched a bit, Misato could swear. But she dismissed it as a trick of lighting. Rei got up and left. She couldn't disobey an order. She paused, without looking back, seeming to take a moment to absorb the feeling she just had, and the feeling of being near Shinji, and walked out the door. Unseen to the occupants of the room, She looked upward dreamily, and sighed.

"Shinji, I though I had lost you forever!" Misato sobbed it out a bit. The memory of the previous month of preparing to extract Shinji had come back with a vengeance, overwhelming her.
"Misato."
"Shinji...I'm just glad you are ok, I don't know how I would be without you. You are family to me Shinji."
"Misato.... I...am glad to be back." He didn't have a clue of what else to say. But he did allow a smile to show.

Misato cried on Shinji's chest for a little while. Shinji didn't choose to embrace her. He didn't know what to do. After a while Misato wiped her eyes and stood.

"Lets go home, Shinji."

It was then Misato noticed that Shinji's eyes seemed red...and irritated. She decided it was because of what happened. Misato walked out the door, and Asuka was running off out of sight, or out of Nerv. Misato smiled.
Asuka bolted when she saw Misato come out of the door, she didn't want the baka to think she actually cared about him. She was above caring about such an idiot pervert. Or so she thought.
********
Shinji got home and was greeted by the normal Asuka attitude.

"About time you got your lazy ass home!"

Shinji just smiled at her. It made her insides melt, and she smiled inside too, but she continued her assault. Nothing she said had any true vehemence to it.

"What's up with you eyes, you on drugs or something?"
"Wha-what are you talking about?"
"Your eyes. They are all red."
"I can explain!"
"So what drugs did you take?"
"It's not drugs...I'm...I'm part angel."
"HA, very funny baka, seemed like you developed a sense of humor."

With that, the Red demoness decided to call a break. She sat down on the couch.

"I better have a NICE dinner tonight. I have had to put up with Misato's cooking for WAY too long. I could only hope to avoid the food poisoning."

Misato was walking to the fridge for some beer. She sweatdropped.

"Oi, Asuka, My cooking isn't that bad."

"I didn't know if I'd live another day, I thought I was dying when you fixed me that ramen that tasted like it had a little bit of everything, things I assume DIDN"T mix. So I also assume you must have a stomach of steel Misato."

Misato sighed and hung her head low in shame and defeat. She opened the Fridge, and pulled out some of her favorite beer. She felt like chugging after Asuka's comments.

Asuka commended herself for a job well done. She would give herself mental high fives, but Misato was so pathetic it wasn't funny sometimes. Shinji smiled, before he went into his room. It looked like someone was sitting on his bedside, even sleeping in his bed. Why would someone do that? He closed the door behind himself. He looked in a mirror. He then realized what they were talking about. The contacts were irritating his eyes. He sighs, and took them out, and went to sleep.
-Author's notes-
Well that's a rap. I gave some Asuka in there for you Asuka fans. Perhaps next chapter I will put some Hikari in there for you Hikari fans. Or some Touji. I got it, how about BOTH! That will work. I already have a scenario developing on how Touji and Hikari could affect others...*rubs hands together maliciously* Yes. Yes indeed.
Until Next Chapter....Ja ne!

Lime Warning: The following OMAKE is (to the Lucky Charms theme) "pervertedly delicious!"

*OMAKE* Thought I'd through this in...
"Shinji!" gasped Rei, "Your eyes, they are...red!"
"What?"
"Yes Shinji.... So very red," she said sensually, while she all but drooled.
"Wh-Why are you looking at me that way?" Shinji stuttered.
"Because you remind me of me...I never realized how sexy red eyes on a person....you are sooooo sexy Shinji." She said in a surprisingly sultry tone. She started sauntering towards his bed...
"Ayanami, what are you doing?"
"Call me Ayanami-sama Shinji." She crawled onto the bed over him.
Shinji looked into her eyes.
"Uh..*gulp* Ayanami, why are you pulling on my hospital gown?"
"I want it off...NOW"
Rei ripped off his hospital gown, and lifted her uniform. Shinji nose started bleeding. Rei was wearing nothing underneath.
"Now you will be MY bitch Shinji. I was waiting so looooong for you to awake, I already wanted you as you were Now, I want you even more."
Shinji gulped. She lowered on to him and started bouncing slowly, and started moving faster. She then slapped him.
"What's my name!"
"Ow, what the hell?!"
"WRONG ANSWER"
::SMACK::
"Ayanami!" She slapped him again.
"What's MY name!"
"Ayanami Rei!" He gets bitch slapped again.
"WHATS MY NAME!"
"Ayanami-sama."
"That's right, and you are MINE, now make ME scream."
She spun Shinji onto the top of her...his nose was dripping blood onto her, but she didn't care. Those Red eyes turned her ON.
Shinji gulped again. He doesn't know how he gets into these situations. Things like this are impossible. Angels, Eva's, A albino girl with blue hair pouncing you because she thinks your eyes are sexy...It just didn't happen.
"But then", Shinji thought, "Everything happens with me."
*END OMAKE* Hope you enjoyed this spur of the moment thing I thought of.