Chapter One~ The Threat Returns

As Samus headed for the Galactic Federation HQ, she began to get nervous. She knew what it was about. She had deliberately disobeyed the Galactic Federation's direct orders to leave B.S.L., and she completely wiped out all of the X parasites there, not to mention, destroyed the scientist's research on Metroid Growth. However, she knew what she did was right. But she was still unsure of her fate. She did know, however, that they were not happy with her actions. She was also informed that she would be getting the metroid taken out of her. She was glad of this. But she would have to face the GF before her operation.
"Samus, we're three parsyks from the HQ."
"Okay Adam, prepare for docking sequence" Samus was really starting to get nervous now. However, she exited her ship, and began walking to the elevator that would take her to the GF meeting room. Before she knew it, she had reached the elevator.
"Well, there's no turning back now." Samus stepped inside the elevator and it began to rise. She couldn't tell how long she had been in. She knew that it was no more that a minute, but it seemed like forever. About halfway up, she started twirling her blonde hair. Then she heard it. A loud bang rang through the entire building, and power went out, shutting down the elevators.
"What's going on?" Samus tried kicking open the elevator doors but as hard as she tried, she couldn't. She then touched the jewel on her wrist, which activated the Fusion Gravity Suit (A/N, I always imagined that samus had a blue jewel on her wrist and whenever she touches it, it activates her suit. I mean, no one can wear that all the time) She then activated the plasma beam and blew open the door (A/N I'm basing this fanfic mostly on Metroid Prime). There was just enough room for her to jump down to the ground level. As she jumped, she heard another explosion. A much bigger one. When she reached the ground level, she blew open the door, and was shocked. The place was in ruins. She switched to the thermal visor to search for heat signatures of survivors. She could since very faint ones, but then it was gone. She decided to go to the stairwell and head up to the GF meeting room to make sure that the leaders were okay. But when she turned around, she detected a major heat signature in the room with her. It seemed that it had spotted Samus as well. She fired a few plasma shots at it, but it didn't seem to phase it. However, the creature ran past Samus and ran up the stairs. Samus followed suit, while firing plasma shots at it. From what Samus could tell, it was human shaped. Yet, her shots didn't seem to effect it. It stopped, blasted a door, and ran through. Samus followed it, but soon lost track of it. She then heard a space craft taking off, and she knew that the creature had gotten away. She looked around the room hoping to find a fuse box. She spotted one, switched to the wave beam, and shot it. The lights came on, but barely. She switched back to the combat visor, and began running for the meeting room, when she heard a voice.
"Samus, Samus is that you?"
"Who's that"
"Its me, Eric."
"What happened here? What was that thing"
"We don't know. It's very powerful however. It seemed to have one target. The council members"
"Are they okay?"
"Yes, they're fine. We managed to hide them. If you had not arrived here, that thing would have found them. Then entire top floor is completely gone, and the next few floors and heavily damaged."
"Hmm"
"What bothers me most is that it used a power bomb. And it had all of your weapons."
"What?"
"Yes, your as shocked as we were. Come, there is something we must show you." Samus followed Eric to what seemed like a solid wall, but after he knocked on the wall he said "Open up, its me Eric. I brought Samus" The door then opened and revealed a large open room, with full electricity.
"Samus, glad you're here" said a man in a white jacket. It was Perry, the head scientist (A/N If there are real names for these people, please let me know. I never played the original)
"Are all of you okay?" Samus asked
"Yes we're fine. We need to get your operation out of the way. Hurry, there's no time to waste. We must hurry." Perry rushed out of the room, closely followed by Samus.
"Is this going to hurt at all" Samus asked, breaking the un natural silence,
"Well, we've never preformed this before, but it should be pain free. And besides, it its not, we can fix that if it occurs"
"Oh," was all Samus could say. Her thoughts then turned to the thing she fought earlier. Her most powerful beam had no effect on it. How could she possibly fight it when it actually attacks her, and doesn't run away. And why did it rum away. It obviously was more powerful than her, yet it chose to run. How could she compete with something that could destroy the entire top floor of the Galactic Federation HG. That's when she saw it. In the shadows of a corner in the room, she saw something that shocked her beyond all belief. A Metroid.

. ARRG BAKA WRITERS BLOCK!!!! I'll try to fix this, but I want to see what people think so far.