Disclaimer: Don't own Stargate Atlantis and never will.
John knew he wasn't going to like what came next. The look in Beckett's eyes made him worry. He just wanted to now what he'd found while examining Elizabeth.
"Okay, what did you find?"
"Major, this is difficult to explain and I don't even know where to start."
"How about starting with the problem."
John respected Beckett, but sometimes that guy just went on and on.
"John, you remember when Dr Weir was abducted by the Wraith a few months ago and I said that she was fine?"
"Of course I remember, I assembled and led the rescue mission."
Beckett ran his fingers through his hair.
"I think I may have underestimated what happened while she was under Wraith control."
"We... we know what happened Liz told us everything"
Beckett raised his voice in anger.
"Liz told us everything she remembered. Not ever thing that happened, which is why I think she doesn't know this."
John raised his voice equally as angry.
"Then what the hell is wrong with her?"
"She's pregnant John, with a Wraith."
TBC...
Not a very long chapter. Sorry that it took a while to get to the point.
The next chapter will not carry on immediately from this but it is going to be a special flashback chapter. Chapter 6 will carry on immediately from this chapter just in case you want to skip straight there and miss out the flashback.