This is my first story on fanfiction. This story is rated M for a reason. Most chpaters will contain graphic scences of violence and intamacy. Do not read this story unless you are mature enough to handle this type of story.

I do not own Neon Genisis Evangelion nor do I claim to cause if I did I would be alot richer.

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It had been three years since Third Impact had been initiated. In that time the world pretty much returned to the way it was after second impact. Tokyo 3 had been rebuilt, the Eva's recovered and improved upon, Nerv was reinstated and now under the command of Fuyutsuki, with Misato as his vice commander and still Director of Operations. Even though Nerv and the Eva's were ready there had not been any attacks on Earth by Angels or anything of the like since Third Impact. Nerv was pretty much only reinstated as a precaution to make the citizens of Earth feel a little safer at night. Nerv, in total, was running at better efficiency then before. In Japan they had a total of four Eva's and four pilots.

XXXXXXXXXXXXXXXXXXXXXXXXXXXXX The Eva's XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

Each of the Eva's were discovered at the same time as there respected pilots each appearing in their individual cages. The Eva's were all completely regenerated when they were found. Over the past three years the Eva's went through some new designs inside and out. Each Eva was fitted with a working S2 organ allowing for an almost unlimited amount of energy and it got rid of the need for the pesky umbilical cords. Eva Unit 00 was better upgraded for battle allowing for use of all types of weapons and armor like the other units. The large triangles on the shoulders of Units 01, 02, and 03 (used for holding the progressive knife) were removed to allow for better combat maneuvering. Also the progressive knifes were upgraded and now the blade can be made to extend to any size (knifes, daggers, short swords, and long swords) and still compact into the hilt for easy storage. The progressive blades were now carried in either the hidden leg holsters, which expand out from the armor to obtain the weapon, or on the new special magnetized belts. The rifles and blasters have all been upgraded to use laser ammunition in order to remove the worry of how many rounds were left and to make the rifles more effective. All and all the Eva's were now better and more efficient then ever before.

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX The Pilots XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

The First Child, Rei Ayanami, was found one month after Third Impact. Besides having aged Rei had changed dramatically. When she was found her hair was light brown and her eyes were a darker brown. Her skin, while still pale, was significantly tanner and made her look more human. This was due to her Angel DNA being replaced by Gendo Ikari's making her Shinji's full sister and 100 human. Beside the changes to her physical appearance she opened up and blossomed emotionally as well. After Third Impact she became very good friends with Asuka and Hikari, much to the dismay of the "Three Stooges", which helped her make the transaction into every day giant robot piloting teenage life. Also over the three years she had grown an inch or two and blossomed into a young woman of subtle beauty. Since she didn't feel quite up to living without her new found brother around Misato allowed her to move in with them.

The Second Child, Asuka Langley Sohryu, had of course returned with Shinji to the beach next to the sea of LCL. The injuries she had received from her fight with SEELES Eva series had been healed over time. She was now able to use her arm effectively but her eye had to be healed with the help of nanotechnology, which actually improved her eyesight greatly. She, like Rei, also grew a few inches and became even more beautiful having turned into a woman with runway model looks. She was still as feisty as ever but since her time on the beach with a certain brown haired boy she became a lot nicer to him, as long as no one else was around and when she did insult him her insults no longer were meant to hurt but more to tease. She still pretty much hated Toji and Kensuke but that could be because they still teased her about her "imaginary" feelings for Shinji.

The Third Child of course is Shinji Ikari. Third Impact had quite the lasting effect on him. For one he finally started to grow a backbone and didn't apologize for everything, except for special reasons. About a year after Third Impact he even started to tease and taunt Asuka back, until she starts swinging at him that is. In the years after Third Impact natural growth and Nerv training had been good to him as he had grown to be a little over six feet, and had broadened out a bit giving him an athletic muscular form. Since he was built more like an athlete then a weightlifter it was easy for him to hide his muscle growth from certain drunken guardians that might tease him. Without his father and the pressure and doubt he had from him Shinji's life started to look up. His performances in the sync tests were even greater and he actually started to enjoy life.

The Fourth Child, Toji Suzahara, lost his left arm and leg in the battle with the thirteenth angel when his Eva became possessed. After Third Impact he was the last of the children to return and most believed that he wouldn't but for his own reasons he did. After returning to Earth, the doctors and Nerv fitted him with robotic prosthetic limbs to replace the lost ones. With the help of these limbs and his rebuild Eva he began his career as a true pilot. Even though there hasn't been any really fighting since. The only member of his family to return other then him was his sister, Sakura. Since they did not have anyone of legal age to be there guardian they were taken in by Misato with the others. Living with Misato was a dream for him until she started showing way to many bad habits that even his fantasies started to turn into nightmares. Since then he has decided to stick to girl more around his own age.

XXXXXXXXXXXXXXXXXXXXXXXXXXXXX Living Arrangements XXXXXXXXXXXXXXXXXXXXXXXXXXXX

Since so there were so many new roommates in the Katsuragi apartment they were all forced to move into a larger living space. They moved into a large two floor condo with five bedrooms and two and a half baths. There were four bedrooms upstairs as well as one full bath. The two bedrooms at the back of the condo each led to a small patio that connect the two rooms while the two bedrooms in the front of the condo were connected by a door. Downstairs there was the master bedroom and master bath, the half bath, the kitchen, dinning room, living room, and a small laundry room.

Asuka absolutely refused to have a room connected to either of the boy's rooms and she demanded a room with a patio so her and Rei had the two rooms upstairs in the back of the condo. This meant that Shinji had the one room in the front of the condo and Toji and his sister shared the other. Misato of course had the master bedroom while Pen Pen still slept in his room in the fridge.

XXXXXXXXXXXXXXXXXXXXXXXXXXXX The Story XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

"BAKA SHINJI! GET DOWN HERE RIGHT NOW AND MAKE BREAKFAST OR SO HELP ME GOD I WILL MAKE YOU WISH YOU HAD NEVER BEEN BORN!" bellowed Asuka from the bottom of the stairs. Even though they were better friends now didn't mean she had to be nice to him all the time, especially not this early in the morning.

God damn him and his laziness she sighed and stormed her way up the stairs and across the hall to Shinji's door. Why do I have to go get him up all the time anyway? I mean Rei is his sister so why can't she get up here and do this? As she was thinking she reached for the knob but before her fingers touched the cold metal she was interrupted.

"Would you keep it down devil woman, some of us are actually trying to rest ya know." Toji glared at the red head while he leaned against his door frame dressed in his pajamas still. He arched his back stretching while he ran a hand though his hair before crossing his arms in front of him. Anyone could tell that he had just woken up, probably from her screaming.

"Why should I have to keep it down when me, Rei, Misato, and Sakura are all waiting on his lazy ass for breakfast so we can all go shopping?" she replied matching his glare. It was Toji's fault Shinji slept in anyway. They always stayed up later then they should while playing those damn video games.

"Then maybe you should have Misato cook if you all want to go shopping so bad." His lips turned to a smirk after the words left his lips. He knew mentioning Misato's cooking would just infuriate her more and he enjoyed making her mad and today she was just too easy a target.

Her face turned to one of horror and disgust. "I actually want to be alive long enough to go shopping thank you very much." She didn't know what the boy was up to but it was sure pissing her off. With a huff she turned and faced the door fully considering the argument over.

Asuka had just grabbed a hold of Shinji's door knob and she was about to push it open when Shinji suddenly pulled the door open hard making the door smack into the wall. "Would you guys please let me…" he paused when he heard a small thump and Toji's laughing. He started to look around before he looked down to see Asuka laying flat on the ground. "What happened to her?"

Toji smirked when he noticed Shinji was fully dressed and decided to have some more fun. "O she just wanted to try to get a quick peak at her love changing" he said in between fits of laughter before walking back into his own room closing and locking the door behind him. He wasn't a fool and he knew Asuka would be pissed off when she got back up. Just because he liked making her mad didn't mean he liked the wrath it caused.

Shinji laughed quietly to himself at the situation before bending down at his knees to get closer to Asuka. He admitted to himself that the girl was extremely beautiful inside and out even if she never really lets anyone know how kind and caring she could be. "Are you ok?" He asked finally remembering her predicament when she stirred slightly.

"Do I look ok to you baka?" she grunted and slowly sat up with her legs sprawled out beside her. "I think I broke my nose, and it's all because of you not getting your lazy ass up and making me… I mean us breakfast." she blushed slightly at the little slip up she had almost made. Just because everyone else pretty much knew didn't mean Shinji had to find out any time soon.

"Well are you coming down or what?" Shinji asked her from half way down the stairs. While she had been complaining he had just shook his head and started to head downstairs to get started on breakfast, he was hungry after all.

"What… How… THIRD CHILD DID YOU EVEN LISTEN TO WHAT I SAID!" Pissed off beyond belief Asuka took the stairs two or three at a time to catch up to him. Once she got to the landing she saw him standing at the bottom of the stairs with his fists clenched. She was scared because something seemed to be making him very anxious. Just to make sure she didn't reveal too much though she instantly put back a façade of being pissed off. "Who do you think you are? I should…" she stopped abruptly as she noticed Misato was on her cell phone and noticed that that was what Shinji was watching.

Everyone was quite. Rei and Sakura were sitting next to each other at the table, the younger girl looking at the teens in confusion. Asuka and Shinji were both looking between Misato and Rei trying to figure out what was going on. Misato said she would only get calls on her cell phone when there was something wrong at Nerv.

Rei turned towards the steps when she heard footstep. She smiled slightly at her brother before quickly turning her head back towards Misato. She was nervous and because of the looks on Misato's face she was starting to get even more nervous with each passing second.

Misato herself was very worried. She was given the cell phone because of her new position but she had never received a call on it before. Whenever they wanted to get a hold of her they normally just called on the house phone. The cell phone was only for "extreme emergencies" Commander Fuyutsuki had told her when he gave it to her.

"Right I understand sir." Misato hung up the phone and paused before turning to face the teens. "There won't be any time for breakfast today." She looked very shocked and Rei could swear she saw hints of fear on Misato's facial features. "Sakura go tell your brother to hurry up and get dressed we are going to be picked up by Section 2 agents in ten minutes. That goes for the rest of you as well, and don't forget your ID badges." Once she was done she hurried into her room to get herself ready. God not again... why do they need to pilot to save us all again?

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Nerv HQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

The ride over to headquarters was done almost completely in silence. The only one making any noise was Sakura and that was because she was scared and like most little kids when she was scared she was always asking questions. Eventually though, once she realized she wasn't going to get any answers, she just sat there and watched everyone else.

Once the group arrived they were all quickly rushed to the main control room, except for Sakura who was taken to the cafeteria like she always was when they were here. She wasn't allowed in many places around Nerv but she was required to come because Misato was her guardian. So she had made friends with many of the cafeteria workers over the years.

In the control room Commander Fuyutsuki was sitting up in Gendo's old seat and looked like he was ready to have a heart attack. So they have finally returned but why? Why now, why not right after the failed Third Impact? What makes now so special? He sighed and rubbed his temples with his fingers. At least we are more prepared this time. He shook his head and turned his attention to the entrance when he heard the hissing of the doors opening to reveal his Vice Commander and the pilots.

As they stepped into the control room all of the pilots looked scared. They hadn't been rushed to Nerv since before Third Impact and no one liked the tension that was in the air. Everyone could tell that with the pilots there that the Eva's would be needed again soon enough. Adding to the tension was the fact that three of them hadn't piloted their Eva's in battle for years now and one never piloted at all really.

Commander Fuyutsuki nodded at Misato before turning towards the computer screens in front of him. "Less then an hour ago we received a message from SEELE. Apparently they have returned and they want revenge, badly." He glanced over to the pilots and noticed Asuka take a small step back. "They have rebuilt their Eva's and are planning on destroying us." He saw the look of utter fear cross her face as she took in what was said.

Every pilot was terrified by this news but none more then Asuka. She started to breathe really hard before her eyes rolled back into her head and she fainted. She would have hit the ground but Shinji reacted fast enough and caught her right before she got to the ground. A few seconds later she was laid down and the doctors said it was just from shock and she would be fine once she woke up but as a precaution and to make her more comfortable they took her to Nerv's Hospital Ward.

"Sir," Misato began but had to stop for a second to compose herself when Asuka fainted, "how do you know all of this? They didn't just come out and tell you all of this. Did they?" she continued after the doctors had checked on Asuka. She wanted to go check on her personally but she could barely stand on her own let alone walk at the moment. Before she thought that the members of SEELE were gone, now she just thought that they were a bunch of over confidant morons. Though she really couldn't complain at their over confidence as it gave Nerv time to prepare even though that time might just end up making them all crack.

"Yes Ms. Katsuragi they did in fact reveal this information to me in the message." He turned his attention from the pilots to the Vice Commander. "They also said we would have two months to prepare before they would attack." He sighed and clicked a small button on the consol on his desk which made the statistics of one of the nine identical Eva's under SEELE'S command appear on the main screen. "In exactly two months time they will send their nine Eva's to Tokyo 3 with the full intent to destroy us."

"Well then let's get ready to blow these old assholes into oblivion!" Toji exclaimed shooting his left arm into the air as he did. He looked around with his arm still in the air and noticed no one else seemed to be optimistic about this attack. "Or I could be wrong." he said as he lowered his arm and head down trying to make himself small enough to hide behind Rei.

"Sir, do we stand any chance at surviving this?" Misato inquired looking more and more distressed. "Is there a plan in case this happened or are we going into this blind?" She remembered hearing what had happened to Asuka when she had battled the nine Eva's on her own. I just hope that the outcome will be different this time around.

Fuyutsuki looked between the pilots, Misato, and the rest of the Nerv crew members in the control center before he nodded his head slightly and pushed another button on his command counsel. "Yes, just incase this ever happened we have set in motion two chain of events to help combat this threat." A small screen on his consol asked him if he was sure and with the push of another button the main screen in the control center changed to two pictures, one of a teenage boy and one of a teenage girl, as well as two sets of statistics matching them respectively. "We have trained two more pilots for just this occasion."