AN: Hello readers here is the next chapter I see you guys want me to have the loyalty seal removed from Naruko? *Smirks* well there's a chance I'm not going to remove it... might keep it to pull off a ultimate plot twist or have it removed just for the heck of it as for the pairings or harem it's still some what undecided but maybe later in a certain chapter I'll think about letting it be a harem alright? and don't forget she's a combination of Sil/Eve plus Sarah kerrigan and plus Xenomorph Queen. if you guys don't know who Sil is or Eve watch Species... and Species 2, And the Xenomorph types? Naruko will breed that will be a surprise, *grins* Enjoy the chapter.
Chapter 2: Awakening.
Disclaimer: I don't own Naruto, aliens vs predator, species or star craft.
Naruto was twisting and turning in her coma while she was in her hospital room alone outside her door were Neko and Weasel on guard like The sandaime stationed them to do. It was midnight everything was quiet and peaceful while Naruto continued to twist and turn in her sleep while she was sweating.
( Flash Back 2 years later)
" Get out demon! you don't deserve to live here anymore! you can fend for yourself!" Sneered the orphanage owner who closed the door locking it leaving Naruto out on the streets while the blonde boy had little tears coming from his eyes as he walked off to go find himself a place to sleep maybe his Hokage-jii could give him a place to stay in the morning since the orphanage kicked him out he was only 4 years old. Now that he had no place to go he went into the alley way unaware to him that he was being watched by two anbu with blank masks with the kanji for root on them as they jumped from rooftop to rooftop to follow Naruto.
Naruto sighed as he sadly looked up at the stars of the night wishing why was he always treated like this he was so confused and sad to why every day he gets treated like this and why does the village hate him so much the only people who never shunned him was the ichiraku ramen restaurant, his Hokage-jiji, Weasel and Neko. Naruto just wished he could be loved, he wanted a family and friends to acknowledge him despite his ambition into becoming Hokage so that everyone can respect him for once and he promised himself that he will make that dream come true.
He was about to keep walking until he was suddenly hit in the back of the neck knocking him out cold the last thing he saw before passing out was a anbu with a blank mask.
An hour later Naruto found himself strapped to a table looking frightened seeing a bunch of doctors and an old man with a bandaged face, by the old man and doctors were a squad of anbu in blank masks.
" Shall we begin the procedure sir?" Asked a Doctor Who was looking at the old man.
" Yes begin The procedure Now that we have the kyuubi jinchuriki in our grasp we will see can he survive this experiment since all of our other chosen test subjects died from this procedure so I'm sure the kyuubi jinchuriki won't die from this." Spoke the old man with no emotion in his tone.
Naruto looked frightened as he looked up at the doctors now surrounding him with their expressions showing no emotion.
" Please don't kill me... I'm a good boy!?" pleaded Naruto making Danzo turn towards him.
" Do not worry boy... why would a kill a child with such great potential?" Danzo said with a fake grandfatherly tone.
" You're not going to kill me?" Replied Naruto who looked a little relieved until Danzo showed a dark grin.
" No, I have other plans for you dear boy I'm going to mold you into the greatest weapon ever." Danzo said while giving a nod to a doctor.
The doctor pulled out a syringe filled with a sedative walking towards Naruto.
Naruto paled seeing the syringe he tried to get off the table but couldn't due to the restraints on him he struggled trying to break free but before he could try to speak in protest the doctor struck the syringe in Naruto's neck injecting him with the sedative, Once Naruto felt the drug go into him he tried to fight it but couldn't he felt his body not obeying him plus he felt sleepy for some reason and darkness was starting to take him the last thing he saw before his eyes could close was the doctors were closing in on him as he closed his eyes completely.
Two Days later.
" What's the status?" Asked Danzo who was looking over Naruto's sleeping form.
" We are still working on the procedure lord Danzo but there seems to be some complications" Spoke the doctor causing Danzo to frown
" Explain." He said.
" Well due to the procedure something is stopping us from completing it" Spoke the doctor
" And that is?" Danzo said not looking pleased with this information.
" It's the kyuubi's chakra it's somehow stopping us." He said with Danzo scowling.
" Well enforce the infection into him I want to see what develops!" Demanded Danzo
" Lord Danzo with all due respect if we do wouldn't it damage the seal to the kyuubi?" Protested the doctor.
" Nonsense... I'm sure nothing will happen to the kyuubi's seal since the yondaime put alot of effort into this seal" Said Danzo now grabbing a large syringe filled with some type of substance into it. As he pulled up Naruto's shirt and without hesitation he sticked the large syringe deep into Naruto's stomach where the seal was injected all of the serum into Naruto every last drop of it.
Naruto flinched in his sleep as he felt the syringe impale him and felt his DNA and molecules rearrange once the serum came in contact with his Cells and DNA structure.
Danzo pulled out and stared at Naruto with a pleased smile.
" Now we will see can you survive this... my future weapon" He said turning to the doctor.
" Keep him sedated and let meme know what happens" Danzo said with the doctor nodding as the old war hawk left.
A week later.
" What's the status how is it coming?" Asked Danzo who now appeared as his one eye widened at what he was seeing.
" Her status has increased" The doctor replied while Danzo turned on his sharingan behind his bandaged face
" Her?, what do you mean? He has changed into a female?" Danzo said with rare surprise.
" Yes sir the serum you injected him with has rearranged his Dna, Cells and molecules and even changed his gender so therefore he is no longer a Male just a female.." The doctor said going over his report for Danzo.
" Anything else?" Danzo asked.
" Yes sir her chakra is off the charts sir it's increasing drastically fast and her blood changed Color to green" Spoke the Doctor while Danzo stood there watching Naruto like a hawk absorbing everything the doctor has said.
" Anything else?' He asked hoping there was more to this.
" None so far my lord..." the doctor replied in a emotionless tone
" I see..." Danzo said sighing a little giving the doctor a glance.
" Inform me of what else happens I will be going..." He said with the doctor nodding as he left before giving a dark smile towards Naruto.
Two weeks later.
Naruto groggily wakes up unaware of his current change he looks around with he vision still blurry. he couldn't remember where was he, he began to speak.
" Hello?" He spoke but paused when he realized something why did his voice sound feminine?
" What the hell...?" He spoke again in his female tone with his vision getting better.
" So you're awake at last" Spokes voice with her turning towards the one who spoke.
it was Danzo.
" Who are you and where am I?" he spoke his female tone again.
" My name is not important right now my dear weapon.." He said with a smile
" Weapon?" She replied
Yes you are my weapon... and with your great potential you will make all of konoha's enemies tremble in fear" Said Danzo now throwing a mirror to her as she caught it.
When she looked at the mirror her eyes widened when she saw her reflection her face looked more feminine. As she looked up at Danzo who was standing there grinning a bit.
" What the hell happened to me!? why do I look like a girl!?" Demanded Naruto
" Let's just say I gave you a change to be my perfect weapon and the side effects has changed you to be a young girl" Stated Danzo while she looked horrified.
" Is there a way to change me back!?" she shouted with him shaking his head.
" No ... you're a woman for the rest of your life" He said with no care in his voice.
" N-No this can't be!? there has to be a way!? I don't want to remain a girl!" She said with tears coming out her eyes while Danzo stood there with no expression on his face.
" As I said your a woman forever and you will stay that way until the day you die and serve me as my pet" Danzo said smirking
" I don't belong to you!" She shouted in anger.
" You are now.. you are root property" Danzo said snapping his fingers with root anbu appearing as they surrounded Naruto while she glanced around seeing she was outnumbered.
" Just who the hell are you!? what do you want with me!" She shouted with the root anbu closing in on her with their tanto's out.
" I am Danzo Shirima I am your master for you to obey..." He declared. ( An: Sorry if I misspelled his last name)
" No No!" She yelled as the root anbu grabbed her arms .
" Take her away to a new facility" Danzo said with them doing what he said they dragged Naruto as she yelled and screamed at Danzo yelling death threats at him.
A month later.
Naruto was locked up in a compound with seals all over to prevent her from escaping, numerous times she has tried to escape but couldn't Danzo placed Security seals all over the compound to keep her from breaking free. Her compound is a dark cell designed for her though she has changed she was still pressing to escape out this hell hole and find Hokage-jiji but she doesn't realize she's in konoha since Danzo sealed her away in a new facility so the doctors could run tests on her and study her.
" I hate it here..." She said sitting by a wall with claw marks on it.
She wished someone could come and rescue her but who? she's been imprisoned here for a month... she's tired of going through tests and be properly conditioned as a weapon like Danzo claimed. She swore if she ever breaks free she will kill him that is if it happens.
During her imprisonment here she noticed that she was changing and feeling somewhat different for some odd reason what ever Danzo injected into her was causing another side effect.
A year later.
Naruto is now 5 years old sitting in the corner of her compound wall with her hair now the color of black, her eyes were now obsidian color with a black silt pupil, her nails looked straight but black and sharp as steel, her skin was no longer tan just pale, on her head she grew fox ears they were blonde with black tips, her hands were 5 digit.
But that's not all what changed her she even grew a tail that was longer than her body at the end of her tail was a sharp blade at the end of it as if it was a spear.
Nothing else has changed so far until Danzo decided to train her for combat testing against his root anbu to test her strength she was pitted against two of his strongest root anbu Torune and Fu.
in her fights she was getting aggressive as if she was an apex predator. Though this isn't the first time she has gone aggressive in combat exercise she was like this towards any root anbu she was paired against she often killed some root anbu in those combat exercises which pleased Danzo seeing this side of her. She has killed 13 root anbu and sent 20 in the root infirmary just by ripping their limbs off or breaking them she vented her pent up anger on root anbu.
Given how she was imprisoned inside that compound for a year had changed her , she became merciless, cold, and vicious she even attempted to kill Danzo the moment he released her from the compound for the combat exercise it took him, Torune and Fu to put her down and subdue her.
Her eyes held no warmth just no expression in those warm eyes she used to have before she was kidnapped.
She didn't even know who she was anymore she wasn't Naruto Uzumaki anymore... the Naruto Uzumaki everyone use to know and love was gone or dead due to her imprisonment and enslavement by Danzo.
A day ago she was being sent to a new facility she had chakra cuffs on her she had 30 root anbu escorting her to the new facility her head was covered with a helmet. (AN: think like those helmets from Elfen Lied she's wearing one of those) Now why was she going to another facility? to go through another test and to be experimented on again since Danzo wanted to inject new bloodlines into her to make her stronger since she was checked for a physical by root doctors to be sure she was getting powerful... and healthy to be conditioned as Danzo's weapon.
Before she could be locked away in this new facility she thought one thing.
" Someday I will break out of here and kill Danzo if it's the last thing I'd do though I won't return to konoha... the villagers will never accept me for what's look like now... maybe I will find a new village or just run off somewhere, where no one can find me... "
Those were her last thoughts before being locked up in a lab and to be experimented once again.
( End of Flash back)
( Hokage Tower)
Hiruzen Sarutobi was writing messages to his two former students to return to konoha he hoped and prayed to kami that he would be able to reason with Tsunade to return to awaken Naruto, though in case Tsunade refuses to return he would have no choice but to mark her in the bingo book and place a bounty on her so high that many missing nins will hunt after her plus send hunter nins after her. He didn't care if she was still grieving over the loss of her lover, brother, kushina and minato, He needed her back now to help Naruto and Jiraiya was needed too so that he could check on the kyuubi seal on Naruto to make sure Danzo didn't tamper with it. And speaking of Danzo... Hiruzen had sent every available hunter nin and Anbu with them to track Danzo down since he is now declared a traitor.
" Danzo... you won't get away with this..!" spat Hiruzen still angry for what Danzo did he kept Naruto locked away in those root facilities. Once Naruto was missing on the night he was kicked out of the orphanage Hiruzen had sent all Anbu and Jonins to find him, he even tried to find Naruto with his crystal ball but couldn't find him still for over two years he has been looking for Naruto everywhere in the village it saddened him to think he lost Naruto and failed Minato and Kushina's dying wish.
But tonight he found Naruto but Naruto is now a female now at first he wanted Inoichi to go into Naruto's memories and see what Danzo did but was thinking that wouldn't be a good idea since the kyuubi could be in Naruto's mind and couldn't risk any chances. Though to say he was worried about Naruto and hoping she would be alright this could have all been avoided had not the orphanage kicked Naruto out and gave Danzo the chance to take Naruto without him knowing.
And the orphanage owner who kicked Naruto out had been arrested and sent to ibiki for torture he assumed that the orphanage owner was probably a accomplice for Danzo.
The old kage sighed as he got done writing his messages to his students and sent his monkey summons to give them their messages as he slumped in his chair looking at the window towards the hospital hoping Naruto would be alright and safe since she is no longer in Danzo's clutches.
An Inuzuka Nin walked in
" Any luck on tracking Danzo?" The sandaime asked with the Inuzuka Nin shaking his head.
" No Hokage-sama we are unable to track him" Spoke the Inuzuka Nin.
" I see... call off the search for now tell everyone to report back to the village" The sandaime said with the dog Nin nodding and walking out .
" Where ever you are Danzo I will find you... I will ask Jiraiya for his spy network to find you..." Hiruzen said with a thought glancing at a picture of his sensei and team... he wasn't sure if Koharu and Homura were in on this with Danzo he hoped they weren't.
Morning.
( The Hospital)
It was morning with the sun shining through the window while Naruto was still in her bed sleeping and was twitching slightly as her fingers twitched.
" I think it's time to wake our Queen up don't you agree?" Said a deep voice in Naruto's mindscape while two three figures were nodding.
" Yes it's time to awaken our successor" Spoke a calm female tone
" I concur with Xeno here... awaken our future empress fox." Said another female voice while the 3rd figure nodded.
" Very well but when will we have a personal talk with my vessel?" Spoke The female voice.
" We will do it the moment she enrolls herself in a academy since the Hokage had found her and saved her from that old man who used our genes to turn her into what she is" Spoke the 3rd figure in a sultry female voice.
" Then it's settled when she graduates from the shinobi academy we will all talk to her understand Xeno and Sil" Said the first figure with purple eyes.
" We understand sarah" Spoke Xeno who was hissing slightly looking at Sarah
" Okay kit it's time for you to wake up." Said the deep female voice.
Moments later Naruto cracked opened her eyes seeing her vision was blurry again as she glanced around to see where was she.
" Where am I?" She spoke looking at herself in a hospital gown while her vision was starting to adjust.
She paused by looking around her surroundings she was hoping this was a dream she couldn't be in a hospital she slowly got up out the bed but fell trying to stand herself up as she looked around as she turned towards the sun which blinded her as she stepped away and shielded her eyes from the sunlight.
Wait the Sun? she realized something just now she was in the hospital and finds herself in sunlight that only meant one thing.
She was rescued.
" Where a-" before she could speak the hospital doors opened revealing Two Anbu with a weasel mask and neko mask and a Doctor Who looked shocked.
her eyes narrowed when she saw the anbu.
" Naruto you're awake..." Spoke Neko
" Who are you...? how do you know my name?' She spoke with venom.
" Don't you remember us?" asked Weasel
" No... I don't where am I..?" Naruto asked.
" You're in konoha..." The doctor answered.
That was all Naruto needed to know... her face went into shock hearing what the doctor said her eyes narrowed... konoha had rescued her?
" Where is your Hokage...?" She said with disdain in her voice.
" We will inform him immediately... just stay where you are your safe here.. Naruto." Spoke Weasel while Neko nodded did a body flicker to report to the Hokage.
Naruto sat down not looking pleased and not happy with where she is at... for the past two years they finally found her and rescued her.
She wanted to run out of here and escape from konoha but couldn't she wasn't at full strength she needed to eat to get her strength back up all she had to do was wait till they brought the Hokage.
Weasel was watching Naruto like a hawk to him she looked somewhat beautiful and exotic.
The doctor wanted to come by and check Naruto only for her tail to whip out and point at the doctor.
" Don't touch me..." Naruto warned not trusting the doctor as she stepped away in fear a bit of what Naruto could do to her.
" She seems to be hostile towards doctors..." Thought Weasel.
It wasn't long till Neko and the Hokage finally came while Naruto turned her glance towards him.
" Hello... Hokage-san..." She said with no emotion as he flinched at her tone.
" Naruto..." He whispered... sadly at how cold she was.
To be continued.AN: OK that's a rap next chapter is coming next week tell me how you liked it? Elf kitsune is coming in three days or two days I hope you enjoyed it those three in Naruto's mindscape with kyuubi was Queen Xenomorph, Sil, ( from species I prefer to use her instead of Eve) and Sarah Kerrigan they will meet Naruto when she graduates from academy and she might reveal her powers. I'm planning on making Naruto dark in this Story or grey.. I'll change the name to Naruko in chapter 3 ok. And for the pairings and junk I'm just gonna make it a flat out harem maybe. and why grey Naruko? or Dark Naruko given how Danzo changed her she is gonna be cold a cold empress she hates humans so yeah her alien nature and instincts will change her but do not worry she won't hate everyone in konoha though and yeah I'm gonna have jiraiya and Tsunade come to the village and see Naruko if you have any questions Pm me or say your suggestions in the review box and I'll read them see you later.