Disclaimer: I don't own Phineas and Ferb or any elements (i.e. Character, Places, Music, etc.), Disney dose, specifically Jeff "Swampy" Marsh and Dan Povenmire.


Author's Note: Okay, sorry I took forever to update this story, got really bad chase of Writer's Block, and well a bit lazy... but I am starting to back being more active in Fanfiction. There is a nice new feature where you can export chapters you already uploaded from story Manager to the Doc Manager, even if the chapter in the Manager had its time expired. So as you know I rewritten some parts and the ending of the chapter is different. I'll finished the story that parallels this one, do the crossover that connects this one and the other story. R&R.

P.S. I added an Trailer at the ending.


Chapter Summary: Phineas is accuse of horrific crimes and becomes the most wanted and Perry got only a limited time to clear his name before Phineas' sentence carries out.


Chapter 9: The Doppelgängers and a Twist

Phineas' POV:

These last couple of days we've tried to get me turn me back from a badger to human, but the companies where we get our supplies from were all vandalized and it'll take a week or two to repair the damages. As much fun it was being a badger I would like to become a human again, and we only have a week and a half to change me back or the change will become permanent, so I hope they repair the damages before then. And if I turn back human I don't know what will happen to my Secret Agent Status… Anyway, until they repair the buildings we can't get supplies, and I don't want to get anything from Dr. Locogisu's Evil Industries because it might be risky and may figure out my true identity.

Speaking of Dr. Locogisu, I was just called into Perry's lair by CSM Weaver, I entered and sat in Perry's chair and Weaver appeared on-screen, he looked depressed as if someone he didn't expect did something terrible, he started in disappointment and sorrow, "Agent P due to you resent unruly, unlawful behavior…" As he was saying this, videos of or what looks like me committing crimes, first was something minor like kicking a trash can, then more major to robbing a bank running out with a blood stained knife and breaking into a car that was stop behind other cars, the driver was trying to push the look-alike out of the car. I didn't dare look at what the animal did to the innocent driver I look down hearing the screen, I look back up and he pushed the man out of the car got in driver's seat and drove off going around the stop cars by going into the wrong lane and dodged oncoming traffic with the police pursuing him, and then the screen changed him standing in a warehouse holding a lit match and dropped it on the spilled fuel trailing to boxes soaked with fuel setting the building ablaze. During the video Elisa and Brian walk up to me they both have mixed expressions of anger and disappointment, but Brian has a hatful look that man who got killed by my Doppelganger was his only owner and now he's ownerless. I would be mad too if I wear him, "…which is still incomprehensible that an individual such as yourself would ever do such unspeakable acts." He held his head and said "We also find that your DNA matches that of the found at the crime scenes."

Max come up behind him with tears in his eye and cried "Why?! Why did you done such terrible things!" Weaver pushes him back and said "Not yet Max." Weaver turned to me and said "Phineas Flynn, I'm afraid we have no other choice, but to take you in and have you face the consequences for your actions according to law that applies to animals by Feudal and State law." CSM Weaver turns to face his intern and said "Okay, Max now." Then Max repeated "Why?! Why did you done such terrible things!" then he turned to Elisa and Brian, "Okay, book'em." I jump up out of the chair made them handcuffed each other. I can't believe that I just got bumped up from a rookie to a Level 7 threat, now everyone here thinks that I am a killer and if I'm caught I'll get the type of punishment that dangerous domestic animals gets, and that is death. That imposter is most definitely a clone. And I know just the person who is evil enough to do something like this, one person whose have skill in bio-experiments has no remorse of who gets killed by his experiments. I got to get out of here, expose Dr. Locogisu and clear my name.

As I ran for my life CSM Weaver said though the Inacom "Red Alert, Red Alert, renegade Agent on the run, culprit is extremely dangerous, calling all Agents and Elites available to capture him…" paused with hesitance then continues "…dead or alive." I began running from all the Agents in the Agency, and with the Duck agent with his chair ready to smack me with it. What's with him and using chairs as weapons?

Then I ran into Perry I fell backward, then I push myself up, I then chitter "Perry, please..." Then Perry cut off with firmness putting his paws on my shoulders "Phineas I know you are innocent, Doofenshmirtz did the same thing with me." Perry then jump and flip over landed into his fighting pose staying between me and my pursuers, Perry chittered "Guy's stay back, Phineas is innocent!" Brian cut him off growling in anger and grief for his owner baring his teeth and barking "His DNA matches the sample from all the crime scenes, Perry!" and a Wolverine agent growled "Perry he is guilty, he got to pay for his crimes!" then we heard another barking "That's right Perry." we saw Hannibal walking up to Perry commanding "Stand aside Perry." As Hannibal attempts to walk over to me, but Perry wouldn't let him, he looks ready to fight Hannibal Perry then keckered "Hannibal, please let me prove his inno-" Hannibal knocked him aside, I saw him hit the wall and fell to the ground.

Hannibal starts to make his way to me took a step backwards, then Perry jump on him and Perry chattered "Phineas get out of here!" I started running hearing Hannibal barking angrily and viciously "Everyone kill that Badger!" they obeyed the higher ranking Elite Agent, I started running from the Elites and other higher ranking Agents as they chase after me. I made my way to a shoot that leads to Maple Street.


Perry's POV:

Hannibal thrown me off and I crash into a wall again, I weakly got back up wincing from the pain, and the other Agents came up to him and reported "Hannibal, he made his way out." Then he barked angrily "What?!" gesturing like he wanted to strangle the white Labrador that informed him of the news, then he claimed down and turn to me and calmly yet sadistically continued "No matter since he's a Level 7, he'll be capture by Animal Control will be deal with him." I can't let them execute Phineas for something I know he didn't do. I got to clear Phineas' name and to do that I have to head to Locogisu's Evil Industry, as knowing what I was going to do, Hannibal order me "You are not going anywhere Agent P." I didn't listen I turn and head to the exit, "Agent P I forbid it!" then they got a call and they stop, with Hannibal very upset as if Phineas living will get in the way.

Flashback

When Major Monogram told me "Agent P one of Command Sargent Major Weaver's Agent gone rogue, Carl is getting more of the detail then you go after that renegade." Showing he details what crimes the rogue did and Carl then came up in shock "Sir, that renegade is Phineas Flynn, he committed those crimes!" the Major exclaimed "Great Googly Moogly." No way Phineas would do anything or anywhere close to those kinds of acts. I just know something is up. I texted my Superior "Sir, it could be clones! Remember Doof made clones of me to ruin me? Let me prove his innocence." When he got the message he looked up from his phone to me and said "You believe someone framed Phineas?" I nodded and he then said, "Well then if that so, you should head down-" I didn't let him finish I just headed to save Phineas from getting mauled by the Elite and other Expert Agents.

End of Flashback

At least Monogram did something to hold of the Agents from Phineas. I must expose the real culprit, so I got on my scooter.

Phineas' POV:

After I made my way and started running to Locogisu's Evil Industry, but then a grasper around my neck tight I look up and see the same two Animal Catchers again "Okay Bob we got that Dangerous badger!" I start to chattered loudly in distress "I'm innocent, let me go!" but of course they don't understand me and even if they did they won't listen, they put me into the cage, then I heard someone yelling "What are you doing to Phineas?!" I turn my eyes to see Isabella standing there in anger, with the fireside girls, and my other friends, Buford, Baljeet, and Django… and Irving. Django is standing there asking "Why are you guys taking Phineas away?" then the other Animal replied "Because child when Animals that lives in domestic homes starts to become dangerous to other people authority has to take them away and put them done." The door closed I couldn't hear the conversation, but I know my friends are trying to plea for my innocence but their word fell and deaf ears and then I heard the door open hearing Isabella yelling, "You can't do this he wouldn't do those can of thing it must have been another badger!" then the door slams the engine turns on and the van drive away as I saw my friend running to my house to tell my family and figure out a way to save me.


Perry's POV:

Locogisu's Evil Industry!

Oh, brother I expect a villain as evil as Dr. Locogisu wouldn't be as cliché and predictable as others, still they should so switch Phineas' Nemesis and mine! I made my way to the building and unlike Doofenshmirtz it looks like he has employees, I arrive saw a clone of Phineas enter the front door, I just drive under the bar barriers with a security guard not noticing me. I parked at the visitors' parking, up to the building and pulled out my grapple hook fire up to the roof and pull myself up. When I got to the top of the roof of the penthouse I ran to the skylight and opened it and lower myself down with a rope.

As soon I got to the ground I got surrounded by the evil clones of Phineas, "So I figure they captured Phineas the Badger, since you are here instead of him?" Dr. Locogisu walk out of the shadow laughing sinisterly "You want to clear his name hah?" he mocked I just stared at him my fist clenched as he starts to monologue "Well, Perry the Platypus too bad! You see Phineas had stopped at me he has thowt my plans one too many." Dr. Locogisu continued with his cliché monologue gesturing to the clones, "So I decided to create a bunch of evil doppelgänger to discredit and totally destroy him!" gesturing to his machine with the clone coming out, he folded his arm and grinning "And I can't have you or Phineas get in the master plan now can I?"
I just stared at him chittering "Master plan?" he then realized what he just said "Oh, I said too much and now I'll have to make sure nobody else knows." The Doctor snapped his fingers then the clone of Phineas came after me.

I pick up a crowbar and smack the any clones that came near me, one came on my left I turned around and hit him in the face, and another on my right under his jaw hearing a bone-break, as more came I spanned around my weapon hitting each clone around me, then they jumped on me, with Dr. Locogisu exclaiming "Now finish him!" but before they do I throw off the clones, but more came after me and I just continued to knock off the clones that came near me. This feels awkward killing them even if they are clones they are more than robots they are legitimate flesh and blood, cold-blooded clones.


Ferb's POV:

Why do all the regulations for animals, has to apply to Phineas? He should get a trial and not be put down like overly aggressive animal, but since he's a badger he does not get those privileges and according to law that since the DNA match he doesn't get an Animal hearing. So we all, all my friends, and my family Dad, Mum, and Candace head to the animal shelter and convince them that my brother's innocence. But they wouldn't listen to us as the man behind the desk, "Sorry everyone but the evidence is sound and all the DNA matches the Badger, I replied "No I know my brother he would never do any of those stuff, I know it must have been some other badger!" they all looked at me as I rarely speak more than a couple of words.

The side doors opened with an animal shelter work staff worker as he carry the cage, "You sure this is the badger, I've carry a lot of cages with aggressive animals, but this one haven't made a sound, and it's not tranquilized." The man behind the desk replied "That animal's dangerous." I know it's my brother as I walked up to the man holder the cage and asked "Please sir, Phineas is innocent." And he replied "Sorry kid we got our orders." And we all try to say something in Phineas defense, but our words fell on deaf ears. Unless we can do something, by 11:00pm they are going to put him down.

"Why can't Phineas get an Animal Hearing!" I yell which made the staffs to look at me, "Please let us prove his innocence. We have the right to a animal hearing." They just have to at least give us a chance, they just have to. Finally they the manager says "Fine a hearing." Then they given was papers to set up a hearing, "Don't worry Phineas will get you out of this miss."

Perry's POV:

I thought back at when Doofenshmirtz made clones of me, and how I throw Jerry into the machine and suck all the clones into it and then exploded, but this time I have to do something different from that time. I then saw a cylinder with piston pumping into them, if I could just get to that contraption I could jam the generator and causing it to get stall and explode. I started to run to the device with Dr. Locogisu yelling "Stop that Platypus!" the cloned badgers chase after me, but I repealed them with the crowbar, then the clones surrounded me, I continue to fight off the clones on, even though they were clones I really don't like taking lives... more waves keep from the contraption, I clear which wave.

After I cleared the waves, before I can make my way to the device a large claw slammed on me hold me down and heard "Got him dad." from the creature that is holding me down as Dr. Locogisu replied "Jikken what did I say about calling me dad?" and turned around and say "Never mind." If the situation this serious I would snicker on the fact that Heisuke and Jikken are like Heinz and Norm.

As I struggle to get out of his grip Dr. Locogisu walks over to the machine and say "You are way too troublesome, Perry the Platypus." He then walk to the wall removed a frame of two encased Newspapers one Japanese and the other American both on a report about two Americans killed by wild dogs in Japan, he then look at the encased Newspapers and said "You know, Sheila's dog relatives and friends got the blame for the actions of my first Experiments." as he place the frame down and where the frame was, there's a hidden code keyboard as he enters his code he continue "And now Kaijū is doing the same thing as my first Experiment." then a small hidden door to a Containment unit for preserving DNA samples opens, as he search though rows of DNA he continues "It's funny that they are the scapegoats for almost anything even after how they help resolved the Bear, the rouge dogs and the Werewolf crisis, and they still get blamed." he then grabbed one he was looking for, a perfectly preserved blood sample, he snickered and judging by him mentioning his first Experiment, and though Sheila's dog family history, I know exactly what he's going to do with that.

I cannot let him make a clone of the very first Experiment of his, I got to get out of Jikken's grip. Dr. Locogisu opens the DNA compartment to his Cloning Device takes out Phineas' DNA and replaced it with the DNA sample of his first Experiment. I slipped out punched him just before he pulled the lever. He landed on his controls and slip and dragged the two levers down and started it. Dr. Locogisu gloated "Ha, You just started it the machine!" and laughs maniacally.

I widen my eyes in horror as the machine's Door opens and seeing red eyes glowing in the dark chamber, it took one step forward out of the device revealing a large left foreleg with muscles exposed down to the paw that has skin and fur. As it came out of the door it is a large monstrous dog with his left side his body is also exposing muscles, he had a lion-like mane, his right side had skin and fur. He had a leather like skin from the back of the neck down his back to his hind legs and tail. His as looks as descried in Sheila's dog family history he even have the chains connected to his thighs. Dr. Locogisu stood up and exclaimed "Behold the clone of my very first Experiment:...

To be Continue...


Author's note:

Cliffhanger! I hope you like the changes I did to the end of the Chapter. Tell me what you think of the ending...
Will Phineas' name be clear before it's too late? And How will Perry survive facing the massive clone?

This will continue in a crossover as soon I finished the other story "Ginga Densetsu Valiant" once that one's done, I'll start the Crossover I've mentioned in each notes of the chapter.

Until then... shadowayn is out... Peace!