-Last time on Naruto's pokemon journey!-

*Why cant I be Naruto's starter Pokemon?* Tornadus roars at the old man and accidentally releasing a gust of wind that knocks all of the paperwork that the professor had completed that morning. making said professor cry silently for his lost progress.

"You cant be his starter Pokemon because according to a law that the Pokemon league chairman Mifune wrote that states that it is illegal for a trainer to start off with a adult legend and the only way to legally catch a adult legendary is to fill out about 60 pages worth of paperwork that only has a 10 percent chance of even getting approved. it is a horrendous situation. the only way is that a person can get a legendary without the paperwork is to receive an egg of one but there has never been a recorded egg of a legendary. " Professor Sarutobi stated reading the rulebook with glasses appearing mysteriously on his face.

*Ok. I understand. still I wish I could do something to make his life a little better.* Tornadus says glumly as he sees naruto outside playing with the water Pokemon and getting ready to go home.

*'I think I might know the way but I will need guidance from master Arceus first.* he thinks to himself as he watches the professor leave.

-Chapter recap End-

Chapter 2! The First Egg/Journey for his Starter!

[As usial I don't own pokemon or naruto!]

(In an unknown place) There are many types of Pokemon in this world, but there are some species where there are only four or five to the whole species. These are known as legendary Pokemon. Using a mind projection technique all of them know they create a astral form in the hall of origin (Think of Akatsuki when Pein calls a meeting.) All forty nine legendary Pokemon are there from the legendary birds to the savage Genesect. All of them are there but one. Tornadus happens to be missing. "Where's that baka Tornadus? Wouldn't he be here by now?" asked a irritated Thundurus interrupted from pranking the water Pokemon by putting plants that look like Dalmayo weed when in actuality its a plant that's like poison ivy to Pokemon.
"If you didn't notice before Thundurus I'm right here. And by the way... IM NOT A BAKA, BAKA!" yells Tornadus with a tick mark over his right eye. Unlike popular belief Thundurus and Tornadus aren't bitter enemy's but more like brothers that love to prank and humiliate each other in front of the other legendary Pokemon. The third of the family being Landorus who is like the surrogate father to the two.
"Now, now Thundurus this is not the time to pick a fight. This is a class A emergency meeting called by Tornadus and Arceus. So be quitter ok?" Landorus says in a tone reserved for a father talking to a small child.
"URGH DAD YOU KNOW I DONT LIKE THAT TONE OF VOICE SO WHY DO YOU KEEP DOING IT" Thundurus squeals making a scene with sweat drops coming from everyone but Mewtwo and Genesect.
"AHEM! Ok now that everybody is here AND QUIET!" Arceus says glaring at Thundurus who is trying to make his cutest pouting face making some giggle and some gag from the sheer audacity of the scene. "We can begin the meeting. Tornadus can you explain the situation to everyone?"
"Yes I can Master Arceus. The deal is that there are three organizations throughout the elemental region that need to be addressed soon as they have the power to defeat legendary Pokemon. The first organization is known as the Akatsuki syndicate who's goal is to create a new world through Palkia, Dialga, and Giratina's powers. They currently have machines that can even knock out Zekrom and he is one of the top three legends. The second one is known as team sound. They aren't as dangerous as the leader is only strong enough to defeat Celebi but Celebi can easily get away before that happens. And the weakest of all Root corps. A bounty hunting organization led by Danzo. This man has implanted Hypno eyes into his arm so he can hypnotize without even having to look at his opponents. He is a weak battler though. He would need all six of his Pokemon just to defeat one legendary. " Tornadus says with a tone of seriousness that is unbecoming of even him.
"Well what should we do about it? We cant defeat these guys as we don't know very many techniques due to us not having any trainers." Arceus says in a frustrated tone.

We should convene at a later date. So we have time to think of some options and keep in the safe zone Palkia made until we say its safe. If any one of us is captured it could mean the end of the world." Dialga says in a gruff and full of wisdom way of speaking.
"That would probably be best Dialga. Palkia I assume you can make a safe zone dimension for the legends can you?" Arceus turns to the water dragon.
"Your wish is my command father!" Palkia says in a young overexcited sound (think of Rock Lee) "OK MEETING AJOURNED!" Arceus ordered and when he and Tornadus were alone he breaks the silence. "Ok now why did you want to talk to me again?" Arceus asks.
" Its about the boy who rescued me. I originally wanted to be his starter because he has had a very hard life. Here, take a look at my memories and ill show you." Tornadus said to the alpha Pokemon.
"Ok but I don't know what you are going on about." Arceus says thinking that the race he created would help each other more. When he is done with the memory viewing technique he is appalled by the stupidity of humans. It was a mind blowing experience for someone who truly didn't know humans would be so cruel to one of there own kind. Both he and Tornadus vow to help this child somehow. "I understand now but what do you propose to do? I did see the memory where you found out an adult legendary cant become a persons Pokemon unless in extreme circumstances." Arceus told sadly to Tornadus.
"I know a way but I need to find out as much as you know. Arceus, Can legendary Pokemon have eggs?" Tornadus asks the alpha Pokemon.
"For legendary Pokemon its very different. For a legendary Pokemon to have a egg they have to have me there, they have to give up fifty to a hundred years off of their life and they have to give a half a pint of blood. The blood part is easy because you have gallons and gallons of blood in your system. No the hard part is he life reduction technique. Let me see if you can even survive the procedure." Arceus explains as he sends his omnipotent energy out to Tornadus to see if he has enough life force to survive it. It turns out he did, and could still live another hundred years. Much to the relief of Tornadus who wanted to see his kid grow up in the shadows.
"So you want to give your egg to this young human so he can have a friend? That is very noble of you. do you want the egg making ceremony done now?" Arceus asks.
"YES absolutely!" Yells an excited Tornadus.

And so the ceremony was done without anyone in the lab knowing. He places the egg in his cloud as its like a pouch. The next morning Tornadus was scheduled for release. He looks down on the little boy with whisker marks.

"Hello naruto, I want to thank you again for saving me. Before I go I have one question to ask you." Tornadus asked naruto.
"What is it Tornadus" asked a glummer then usual blond. Last night he cried when professor Sarutobi told him he didn't know what to do. "What are your views on Pokemon? Are they friends? Or tools? What do you think?" Tornadus asks in a intimidating pose making naruto a little scared. That is until he heard the tools part "NO! Pokemon are meant to be friends! I may not have had many friends when I'm growing up but ill do anything to protect them. Believe It!" Naruto says heatedly.

" Good. Keep those beliefs for as long as you live. I have one more thing to ask. Will you look after this egg? I found it before I was injured and I when I look through your memories I thought you'd be the best candidate to take care of it." Tornadus says taking a egg that was green with white tornado like drawings on them. Much to the shock of Professor Sarutobi who instantly knew what was in the egg and the fake backstory the egg had. 'You are meant for greatness naruto' the professor thought in his mind.

"I have one more thing to give you." Tornadus told the young blond as he called upon his powers over weather to grow a bunch of bushes on the ground. Uses his aircutter attack to cut all the leaves and seeds off and then put each in their own sack as big as Tornadus himself. (think of ash at milos island only Tornadus is the only one there)

"These herbs are called revival herbs. They have a special property that allows a Pokemon no matter how injured to heal completely. you only need a teaspoon or two of a mashed leaf to get the effects. Also if you put a quarter of a leaf total in all of the Pokemon's food once a day they can grow to be double the size of a normal Pokemon. You'll only need a quarter leaf for all six combined. Not each. Anymore then just a little bit can make them sick." Tornadus says before flying off to the safe zone.
Later that day naruto and Professor Sarutobi eventually retake the test. Which naruto passes barley meaning that he is a official trainer. He has to be there at ten sharp the next day. He comes home to a feast with all his family who flew themselves over from Uzu island to see their young man graduate. His Grand father is the Gym leader of the Uzu island gym. And right now naruto is on his lap hearing a overexagurated story about his gramps beating the champion.
Finally he gets to sleep. However the news gets grim when he wakes up at 11 o'clock that morning.

"SHIT! SHIT IM LATE!" yells a distressed naruto as he puts his clothes on and gets out about five minutes later. He finally gets to professor Sarutobi's lab to see the professor holding the Uchiha by his shirt and yelling.

"HOW DARE YOU DO THAT! NOW THERE ARN'T ANYMORE POKEMON TO GIVE HIM! the professor yells in a tone naruto has never seen before.

"Hn. The freak had it coming. Nobody wants the dobe on a journey anyway so it was better for all of us if I tampered with his alarm clock. The only reason I even told you was because I had my Pokemon already so you cant touch me." Sasuke says coolly as he pushes the professor off of him and walks towards a tearing up naruto " Oh look its you. Look, I don't know how you got a trainers license but nobody wanted you on a journey so why don't you run home and live with your mommy for the rest of your life. Be the failure you were meant to be." he walks off before he can get a response from naruto who is walking to the professor his hair covering the tears that are falling from his cheeks.

"Please say what he said isn't true professor... you have a Pokemon don't you?" naruto asks hugging the professor who has a grave look on his face. "I'm so sorry naruto. The Uchiha got the last Pokemon. If I found out earlier then I would not have allowed him to become a trainer. However since I found out after he got his Pokedex the only thing I can do is to file a complaint to the Pokemon league. Which he would be let off with a warning because of Itachi being the leader of the Elite four. I'm sorry naruto but there are no starter's left." he replied in a defeated tone and feeling like an ass for having to say it.

"So I guess I have to stay one more year huh?" Naruto says about to cry again. "Not necessarily naruto. What I plan on doing is I am going to give you the normal things for a journey, which is the five Pokeballs and the Pokedex. But I am also giving you your early birthday present which was a ultra ball. This will not only allow you to distinguish what Pokemon is your starter but more importantly it helps you capture the Pokemon easier. Now I suggest that you go out to route three to catch your Pokemon instead of route one. The Pokemon on route three are more powerful because a lot of battles happen there. However I warn you that there are many dangerous Pokemon there like Bravery, Staraptor, and Bisharp out there so watch yourself. Ok naruto?" the old man asks.
"You got it gramps!" yells a excited naruto as he runs to route three to catch his first Pokmon. "Weather you know it or not, naruto, you are destined for great things. to get the favor of a legendary Pokemon at this age... well I cant wait to see what you do next" the professor says to himself as he watches naruto head to route three.

There are three routes stemming from Konoha city. there is route one which sasuke and sakura went down, this is the safe path. There are no dangerous Pokemon and it is where most trainers find baby Pokemon. There is route two which is a route to a lake that is known as Milotic Pond. The main reason for this is that the only fish you can catch there are Feebas. since Feebas are generally perceived as the weakest Pokemon besides Magikarp they don't bother the lake. Then there is route three. this road is normally only used for people who have three badges and are heading to their fourth. this is also one of the most dangerous places in the region. This route goes through a forest known as the forest of death, which has many final evolutions.

"Ok so the old man said to look for a Pokemon and throw this ultra ball at them. Oh what's that?" naruto asked himself as he comes across a tiny green snake like Pokemon with two tiny feet and a three pointed leaf for a tail.

"Oh boy an Snivy! Those are really rare! I bet if I catch that I can beat sasuke in no time flat!" He whispers excitably as he gets ready to pounce.

-End chapter-
I'm starting to get used to writing again. As far as Spacing on my fan fiction until I can get the tab button to work It probably wont be as well spaced out as it can be. I probably wont be able to update the story for about a week because I am going through graduation ceremony in a few days and I need to prepare. Naruto's Pokemon when facing the gym are going to be:

Zoroark(starter)

Tornadus(egg hatches)

Milotic

Crogunk

and possible fifth Pokemon.