Disclaimer: I do not own Pokemon. If I did then Ash would age and win everything

Mewtwo Strikes Back

Part 2

New island Fortress

Everyone was quiet, just then one of the trainers got out of his seat. "A Pokemon can't be a Pokemon Master. Only a human can." The boy suddenly cried out in pain as he was surrounded by psychic energy and lifted into the air. The boy then grabbed at his throat as he felt it closing. He couldn't breath. He was then thrown into one of the fountains within the room. He climbed out of the fountain. "I will show you, who is the master. Gyarados go! Hyper beam!" The trainer opened one of his poke ball and released a strong-looking Gyarados. Who was now charging an orange beam within its mouth. Soon as it had built up enough energy it fired the beam towards Mewtwo.

Mewtwo narrowed it's eyes. Was this trainer being serious? A hyper beam attack. Mewtwo created a mirror shield in front of him and then re-directed the hyper beam right at the Gyarados, who was sent flying into the same fountain as its trainers.

"Child's play. That's the best you can do? You I no longer required your assistance. I free you from my control." Mewtwo then sent a wave of energy at the woman who had introduced him. Her hat suddenly fell off, revealing two loops of pink hair. The woman then fell right into Brock's arms,much to his amazement.

"Oh where I am? How did I get here?" Nurse joy turned to see a strange-looking Pokemon, looking at her. She then heard it speak.

"I bought you here from the Pokemon centre. I needed your expertise in a few things. However now that my master plan is almost complete, then I no longer need you any more."

Ash had heard enough. He wasn't just going to sit here and listen to this Pokemon, bully everyone. "Mewtwo if you are the ultimate Pokemon Master, then I challenge you to a Pokemon battle!"

Mewtwo locked eyes with Ash, did this kid really thing he had a chance? Mewtwo had to admit the kid was good, but he was facing the ultimate Pokemon. He would make the boy regret ever challenging him. Mewtwo snapped his fingers and behind him the wall dissolved to reveal a huge battle field. "You dare challenge me? Very well then, you will be the first to fall before my might. Meet me on the field of battle. Prove to me that you are stronger than me."

Ash left the table and followed Mewtwo to the battle field. He then stood in one of the trainer boxes, while Mewtwo stood in the other. Everyone one else were now in the gallery, wondering who would win. Ash pulled down his cap and then gripped a ball from his belt. "Ready when you are Mewtwo."

Mewtwo floated in his own box. Just then the floor beside him opened up and a machine rose up. Mewtwo then removed a black ball from the machine. "You will regret challenging me Ash Ketchum. Charizard I summon you to do my bidding!" Mewtwo threw the ball onto the field. It opened up and a Charizard appeared on his side of the field. However it had brown stripes all the way down its back and tail.

Ash threw his ball onto the field. "Venusaur I choose you!" Venusaur roared as it landed on the battle field to face the fully evolved fire type. It was wondering why Ash would choose him. Charizard wasn't just a fire type, but flying type two. Both were super effective against grass Pokemon. Vanusaur however trusted Ash and prepared itself for a hard battle."

Mewtwo narrowed his eyes. "Do you mock me human! You send out a grass type against my fully evolved fire type. Maybe I was mistaken when I thought you were a strong trainer. Charizard use Flame thrower!"

The Charizard opened its mouth before spewing a huge flame, which was heading towards Venusaur. The flame was about to engulf the grass type, however Ash countered at the very last-minute.

"Venusaur dodge that flame, then use Sleep Powder!" Venusaur jumped back dodging the flame thrower, it then shook the tree on it's back and sent a sparking mist towards Charizard.

Mewtwo growled. "Really human that is the best you can do. Charizard counter with Fire spin!"Mewtwo watched the sleep powder dissolve into the vortex of fire, however it's eyes widened as it heard Ash.

"Just what I was expecting. I knew you would counter it, this allowed my Venusaur to prepare its next attack. Venusaur now use Hidden Power!" Venusaur roared before a bolt of lightning left its tree and struck Charizard causing it to cry out in pain.

Mewtwo watched as the attack hit his Pokemon. Due to Charizard being part flying, the electric attack was super effective and had caused a lot of damage. "Typical human, using dishonesty to get what you want. That will be the last time you catch me out with a trick like that. Charizard take to the sky and use Air Slash!" The Charizard roared to the sky before flapping its wings and taking off towards the sky. It then flew straight at Venusaur.

Ash grinned. "You call me predictable. Venusaur use Stun Spore! Then use Vine whip to smack it into the ground hard." Venusaur roared once more and this time yellow mist left the tree on his back. Just before Charizard had reached him, the mist had hit and now it was Paralysed. Venusaur then used its huge vines to wrap around Charizard and slammed it into the ground. It then used its vines to toss the fire/flying duel type back at Mewtwo.

Mewtwo recalled his Pokemon. How could a Venusaur defeat his fully evolved fire type? It had the type advantage over the grass type. Mewtwo looked over at Ash and saw the grin on his face. That would soon vanish. "You caught me of guard Human, but that will not happen again." Mewtwo then threw another ball onto the field. This time it was another Venusaur.

Ash was wondering, just what was Mewtwo game plan with this move. Both were grass types and so this battle could go on forever. Ash recalled Venusaur and then threw another ball onto the field. "Blastoise you're up. Use Rain Dance!" The fully evolved water Pokemon appeared on the field. It then roared to the sky and watched as clouds began to cover the battle field. The clouds then let loose a torrent of rain onto the battle field.

Mewtwo noticed the rain was coming down so hard that it was hard to see just where Blastoise was on the field. Clearly Ash was using the rain as a defensive tactic as well as offensive. "Venusaur use Razor leaf on the field!" The venusaur roared before sending out razor sharp leafs all over the field."

Ash smirked. "Okay Blastoise, we have drawn them in. Now Blizzard on the entire field!" Blastoise roared before sending out a cold wave freezing all the rain droplets and turning them into icicles that began to rain down on Venusaur and the field. Several of the razor leaf hit and smashed the icicles, however several hit Venusaur doing some moderate damage. The grass type roared still ready for battle.

Mewtwo was focusing on Ash, this trainers reputation was well-earned. Now the field was covered in ice, preventing his Venusaur from moving around on the field. "An interesting tactic human. However now it is my turn. Venusaur Frenzy Plant!" Venusaur roared before the earth shook. As it did thorn vines erupted underneath Blastoise hitting it left, right and centre. The fully evolved water type suddenly swayed and then fell face down.

Ash looked stunned. Clearly this Venusaur was stronger than it looked. Ash recalled Blastoise, and then removed another ball from his belt. This time Knuckles appeared on the field. Ash knew Venusaur had to recover from using Frenzy plant, so he decided to prepare himself. "Knuckles use Bulk up and then Extreme speed!" Knuckles flexed its muscles raising its attack and defence. It then vanished in a blink of an eye before smacking Venusaur several time. It then appeared back on his father side of the field. He watched with a satisfied smirk, as Venusaur fainted.

Mewtwo recalled Venusaur, he was down to his last Pokemon. He couldn't believe this human was beating him. Mewtwo threw his last ball onto the field and out of it appeared a Blastoise. "Hydro Pump the entire field!" The Blastoise roared before the water cannons in it shell shot huge torrent of water over the field. There was no way Knuckles could dodge it, and it braced itself for the impact.

Ash noticed Knuckles was drenched but apart from that he was okay. "Knuckle use Extreme speed and then Aura Sphere!" Knuckles again vanished and then hit Blastoise with its feet and fists. It then jumped back and formed a sphere between its paws, before lopping it at Blastoise. Who took the attack full on and caused it to be pushed back a little. It then roared ready for battle.

Mewtwo was growing tired of this battle. Clearly this human had the Power to defeat his Pokemon, but did he have the Power to defeat the ultimate Pokemon. "Blastoise use Skull bash!" The Blastoise roared before running towards the Lucario. Its head down and glowing."

Ash smirked. "Knuckles use Iron defence, and then Sky uppercut!" Knuckles encased itself in steel and watched as the Blastoise hit him and rebounded away. Quickly it raced towards Blastoise and before its feet could touch the floor it was launched high into the air by Knuckles punch, Knuckles then jumped back as Blastoise came down head first hitting the battle field floor fainted.

Ash grinned. "So much for the greatest Pokemon trainer." However Ash smile soon vanished as he watched Mewtwo glow before floating onto the field.

"Enough of these games. I will show you that I am the ultimate Pokemon!" Mewtwo then used it's power to launch a huge sphere of energy at Ash.

Ash eyes widened, there was no way he could stop the attack, just then one of his balls opened up and Mew flew in front of the sphere. She then used her power to disperse it. She floated in the air glaring at Mewtwo.

"You! So finally my dear sister decides to show herself. We may share the same DNA, but I will show you that our Power is nowhere near the same." Mewtwo then formed a huge sphere around the field trapping Mew and himself inside. This was between the two of them.

Ash flew back against the wall as the force field pushed him away from the battle. He watched as Mew and Mewtwo faced off against one another in battle.

Within The Sphere

"Why do you do this brother? We share the same DNA and yet you want to destroy me." Mew countered another sphere of energy that was heading towards her. She then sent out a sphere of her own flying towards Mewtwo.

Mewtwo growled before swatting the sphere away. "There can only be one of us Mew, and I will make sure that it is I who will rule this world." Mewtwo then sent a blast of concentrated energy right at Mew, who dodged it.

"You're delusional brother. I don't want to rule the world. I am happy being a apart of my daddies family. The boy you just battled his not only a gifted Pokemon trainer, but he is also Lord Arceus chosen one."

Mewtwo eyes narrowed. "Lord Arceus? Who is this Lord Arceus, If he is a Pokemon, then I will destroy him as well. Mewtwo then sent another sphere of energy towards Mew. However again she dodged the attack.

"Lord Arceus is the God Pokemon and creator of the universe. You were brought into this world by his design. You are nothing but dirt beneath his paws. He could destroy you in one hit." Mew dodged another attack.

Mewtwo growled once more. "You lie! I was created in a lab, by human using your DNA. They then tried to make me their slave. This Lord Arceus did not create me. I am the most powerful Pokemon in the entire world!" Mewtwo then used all his energy and blasted Mew. He watched as Mew smashed through the sphere wall and hit the arena wall. Mewtwo then began to form another Sphere. "There can only be one!" Mewtwo watched as the sphere headed towards the now knocked out Mew.

Ash seeing what was about to happen dived in front of the sphere. He had one option. Quickly he grabbed the ball from his belt and opened it. "Darkrai use Dark Pulse!" The Darkness Pokemon unleashed a wave of dark energy cutting right through the sphere.

Mewtwo eyes widened, his attack had been stopped. More importantly this human was prepared to protect Mew, but why? Mew was just a Pokemon, a tool the boy used. Why would he risk his life to save her. Mewtwo then locked eyes with the Black Pokemon now floating in front of him. This thing had blocked his attack. Just what was it. "Who are you? How did you stop my attack?"

Darkrai floated closer to Mewtwo. "My name is Darkrai, and I am the legendary Pokemon of Darkness. The reason your attack was so easy to deflect, was because it was made up of psychic energy. I am immune to all psychic attacks. Now I will teach you for messing with my sister." Darkrai then sent a dark pulse hitting Mewtwo in the chest forcing the Psychic Pokemon to be pushed back.

Mewtwo held his chest. "You actually caused some damage, tell me if you and Mew are so powerful then why do you serve this boy?" Mewtwo dodged another dark wave, he knew the best option was defence especially now he was facing a Pokemon that could actually cause him damage."

Darkrai narrowed its one red eye. "That boy you speak of, is my father, and Mews father. We are not his slaves, he treats us likes family. That was why he was willing to risk his own safety to save Mew. He is also Lord Arceus chosen one, and will be the greatest Pokemon master in the entire world." Darkrai then sent multiple Shadow balls at Mewtwo. He watched as the psychic Pokemon dodged most of them, however a few made contact and Darkrai watched as Mewtwo suddenly flew towards the floor of the arena. Darkrai watched as it crashed down onto the field, amazingly enough it was still able to get to one knee. Darkrai turned to Ash. "Father he is weak, quickly catch him now."

Ash walked towards the Psychic Pokemon, now on one knee. He noticed there was complete silence around the arena. He removed a spare ball from his belt and held it in his hand. He then looked down and noticed Mewtwo was in bad shape.

"So Human, what will you do now? I am defenceless. Will you catch me and make me your slave like you have all your other Pokemon."

Ash enlarged the ball, he was about to throw it, when he changed his mind and reduced the ball back to its original size. "If I caught you then I would be no better than any of the other trainers who saw you as a weapon. I only want to catch Pokemon, if they are happy to join my family. However clearly you do not want to be caught. Therefore you are free to go."

Mewtwo eyes widened. "You mean you are turning down the opportunity to own the most Powerful Pokemon in the world. You know you will never get a better chance of catching me."

Ash looked down at Mewtwo before placing the ball back on his belt and then offered his hand so that Mewtwo could grab it to help himself up. "I told you I will not be like the others trainers. Now take my hand."

Mewtwo looked at the hand being offered to him. He could now see why this boy's Pokemon cared so much for him. He was pure of heart. He could have owned the most powerful Pokemon and yet he was offering his hand in friendship and support. Mewtwo took hold of Ash hand and pulled himself up so that he was finally standing.

"Thank you Ash. You have shown me that not all humans are cruel and that you have a pure heart. You could have caught me, yet you refused knowing that I didn't want to be caught. You truly are one of a kind." Mewtwo then closed his eye and everything was engulfed by a white light.

Ash found himself back outside the Pokemon centre that they had arrived at earlier. He looked around and noticed everyone had a confused look on their faces. Ash then heard Mewtwo speak to him.

"No one else will know what has taken place here today. Only you and your Pokemon will be allowed to remember anything. Who knows maybe next time we meet I might be ready to join your family. Good luck with your journey Ash Ketchum."

A/N: And that's a wrap for the first Movie Chapter. Hope you enjoyed it and stayed tuned for the Indigo League Championships.