Naruto/Bioshock (Earlier this Year/2013)
Descent into Rapture
Chapter 1: Abduction and Initiation
Hinata Hyūga was trying to scream past the gag in her mouth that the Kumo Ambassador had placed there. She could hear some boy wait... Naruto! Trying to face him down. Suddenly they hear an unearthly shriek and Hinata feels herself being taken from the Kumo Ambassador. Next thing she knows a metal woman? With a strange head and a red glowing eye? Has stolen her from the ambassador and placed her in a basket on its... her? Back. Next to Hinata is Naruto who is slightly injured from a Kunai to his arm, Hinata notices the basket has ribbons wrapped around it and pretty drawings on the back of the head and two weird metal cylinders. The woman then turns around and Hinata can see what is left of the ambassador, Hinata gags as she sees the eviscerated corpse of the ambassador lying there in a massive pool of blood. They fly through the air and are quickly beyond the borders of Konoha.
Hinata can see the sun rising in the east when they come to an abandoned beach with a strange metal sphere floating in the ocean a little distance out. The woman swims to it with Naruto and Hinata still in the basket, they get in and she closes the hatch and hits a lever and down they go.
Naruto and Hinata stare in awe of the magnificent spectacle filling the glass window. In front of them lies the underwater city of Rapture. The city once of science and freedom, now of blood, madness, warfare and ADAM. They enter into a special dock to one side of the facility and hear a mechanical voice say "Welcome to Rapture children, you have been selected to be part of our most special project. The Gatherer and Protector project. Normally we only get a girl and leave her to find her own protector, but Senior Gatherer #0254's camera log shows a bond between you two. So we are going to pair you together for convenience. Congratulations Gatherer #0001-2 and Protector #0001-2 first of a new group of Gatherers and Protectors. Guard this city well and you will become its guardians and healers. Prepare for initiation!"
Naruto and Hinata were split apart for this, Naruto was bathed in chemicals and Nutrients that would age him to Fifteen years of age and halt him there until he was chronologically fifteen. Hinata is taken as well and her chemicals and Nutrients age her to eight years of age. Naruto undergoes the special processes that will make him into a Big Daddy. When the time come for the Vocal Cord manipulation the controller orders that step skipped and they go straight to the Psychological manipulation to make him into a proper Big Daddy before they place the armor on him. Hinata is prepared and lays on a surgical table, one of the doctors pulls out a Glowing Sea Slug and another opens her abdomen up. They place the ADAM slug within her and it changes her into a Little Sister, the only difference being that her eyes glow white instead of golden, Hinata is then psychologically conditioned as a Little Sister. Hinata and Naruto are brought back together Naruto with his helmet off so they can see each other, the first thing they do is utter each other's name. The doctors then do something they haven't done in years; they engineer an Alpha Series bond. A few hours later a new Little Sister and Big Daddy pair are unleashed upon Rapture. Smiling happily Hinata gets to work collecting ADAM as Naruto watches over her.
One Year Later - Arcadia
"Look Naruto, ADAM and an angel" Hinata coos happily lost in an insane delusion. Naruto lumbering a few steps behind smiling under his helmet lost in his own delusion. It had been a year since they had been made into what they were and they happily went around collecting ADAM left over from the Civil War. With Andrew Ryan and Frank Fontaine dead before Naruto and Hinata even got to Rapture. They were taking a break from repairs to collect ADAM from Arcadia District, there were plenty of 'angels' in Arcadia but the path to it was damaged so it made getting there dangerous. Naruto and Hinata were the only pair that could get to Arcadia without injury or incident thanks to Hinata's half-remembered chakra control lessons which included walking on walls and ceilings, both of them had mastered this ability and used it to get to usually inaccessible places to both gather ADAM and repair Rapture.
Naruto shakes his head and clears the memories from his mind, he watches as Hinata steps close to the 'angel' and begins to gather ADAM from it. Naruto doesn't even flinch as Hinata drinks the blood gathered from the corpse, Hinata gets up and slow places her Extractor against her arm and inserts it drawing out a small amount of fluid from her body. The mark in her arm heals as soon as she removes the Extractor from it; this was due to the ADAM slug implanted in her stomach. Hinata skips over to Naruto who holds his left arm out; Hinata stabs the Extractor through a port in his left forearm and injects the purified ADAM into his system. Naruto smiles at the fact that His and Hinata's bodies upon receiving their first ADAM injection used the ADAM to create a Gene Tonic that purges the ADAM of impurities like madness and memories from previous owners, theoretically this would protect them from ADAM madness but they were partially insane from mental conditioning so it was a moot point.
Hinata hops back up on Naruto's shoulders where she rides whenever they are moving out from an area, having gathered ADAM from eight 'angels' in Arcadia it was time for them to return to Hephaestus where repairs were being concentrated in order to ensure there is enough power for the entire city. There are eight generators in Hephaestus only five are needed to power the entire city, three are emergency and maintenance backups, only two generators were functional barely enough to power the lights and keep security active in primary districts as well as the primary systems needed to keep the city functional. The leakage pumps, entire City security system and structural scanner would require a third generator to activate.
The Thinker, the hyper-advanced computer that runs Raptures basic systems and overviewed Naruto and Hinata's initiation into what they were was commanding the Big Daddies and what few Big Sisters there were in repairing Rapture. Fortunately Persephone the prison of Rapture had its own power supply and was being maintained by private workers. Currently there were 124,526 Sane Humans in Rapture, 132 Big Daddies, 100 Little Sisters, 12 Big Sisters and an estimated 23,000 Splicers. The number of Splicers dropped daily due to their tendency to attack the Little Sisters for ADAM, kind of like the three thuggish splicers sneaking up behind Naruto were trying to do. Naruto was thankful that there were no guns other then Rivet Guns left in the city, nor were there any explosives left over due to the Civil War.
Naruto smiles and lets loose a roar as he spins around and slams his drill into the first splicers head killing her, He dodges a fireball from the second and the third charges in with a metal pipe in his hand Naruto charges the second one, as he does this Hinata jumps off his back and slams her Extractor into the thirds neck killing him instantly. Naruto gets within a certain range of the second and drill dashes forwards slamming his drill into the second splicers chest and crushing his heart. Naruto turns around to see Hinata remove her extractor from the first splicer having already extracted the ADAM from the third splicer, she sees he is finished and calmly drinks the blood before coming over and extracting the ADAM from the second splicer. She then calmly extracts some purified ADAM from herself and injects it into Naruto saying "More Adam for you Naruto, come on lets go find my sisters and the Mister Bubbles!" Naruto smiles as Hinata jumps onto his shoulders and he walks towards Hephaestus smirking at the nickname of the other Big Daddies. Naruto never questioned why all the Little Sisters called him by his name but called the other Big Daddies 'Mister Bubbles' He also knew that there was one Big Daddy who was called 'Daddy' but he had never encountered him.
Eight Years Later - Surface
Naruto and Hinata who was now a 'Big Sister' with her body being aged when she hit the age of ten to match his, were watching as Eleanor Lamb extracted Subject Delta's spirit and memories from his body and implanted them in herself. Subject Delta had saved dozens of Little Sisters and had spared the lives of Grace Holloway, Stanley Poole (Who was executed later for his crimes!) and Gilbert Alexander. (Who by all accounts now feasts on ADAM flowers in the ocean?) Naruto and Hinata soon left followed by a half-a-dozen freed Little Sisters who had come from Konoha. Naruto and Hinata were still wearing their armor and gathered many strange looks as they travelled from the coast of the Land of Wind towards Konohagakure.
A Month Later - Konohagakure
Naruto and Hinata's journey to Konoha was pretty normal, no bandits were brave enough to attack two people in strange armor and the Shinobi had mostly ignored them. Now they were standing at the gates of Konoha, As fate would have it the parents of one of the Little Sisters were asking the gatekeepers if there was any news of their daughter when "Mommy, Daddy" rang out, the parents turned to see two strange people in armor and several little girls, but foremost in their mind was their daughter who was running towards them.
"Kimika" They shouted and ran to their daughter, the Gate guards were staring slack jawed at the sudden turn of events and the armor Naruto and Hinata were wearing. The parents thank Naruto and Hinata before Naruto laughs and says "We weren't the ones that saved them, we're just escorting them home and coming home ourselves." Before long several ANBU operatives appear and guide them to the council chambers where an emergency session has been called.
Naruto is trying hard to laugh at the expressions of the civilian councilors at his and Hinata's armor and appearance. They are still wearing their helmets having decided not to take them off just yet. Next to them were the rescued Little Sisters minus Kimika who had been left with her parents. Suddenly one of the councilors shouts out "They're probably the ones who stole these little girls and are returning them because they fear our might" That did it; Naruto and Hinata glance at each other before. Laughing, they start laughing to the bewilderment of the council.
Naruto stops after a few minutes looks up and says in a voice deepened due to the helmet on his head "Not only were we not the ones that kidnapped them, we don't fear your power at all due to what we have suffered and our lives to this point"
A councilor draws himself up and shouts "Why you… little brat you what would you know of suffering"
Naruto slams the drill into the ground and says in an ominous voice "I know more than you would you fat pig! I was kidnapped when I was three! I was turned into a monster trapped in this armor; it has taken years for me to regain my humanity. Hime, here was tortured as well by being forced to drink blood and made to crave it, for years we tried to cure it and partially succeeded but even now she craves it! We had our Humanity and our sanity taken from us in a city full of monsters both human and not. Don't you dare try to say we don't know suffering and don't both trying to intimidate us. We were raised in a place of madness and horror; we survived by the skin of our teeth against creatures that shouldn't have existed and monsters far worse than any of you have ever met. I heard about the Kyūbi attacking your village and I say this: I would happily have faced the Kyūbi every day of my life than have spent a single moment in Rapture. The worst part of Rapture is that ALL of the monsters were ordinary people like you at one point in time" The council both citizen and Shinobi had expressions of horror on their faces.
One of the former Little Sisters stands up and says to him "'Ruto why did you say that?" The council had begun to feel relieved at the girl contradicting him when she added "It was far worse than that 'Ruto." The council's horrified looks grew deeper and they began to wonder just how strong the people standing in front of them really were.