I think there was an original timeline the Silence messed up, this is it. The chapters will be posted in no particular order. Cross posted on Ao3.

I swear to fucking God, I will murder whatever deity thought this shit would be funny. Let me jerk you by the arm and drop you off in the middle of the desert for two days. Or, hey, I know! Let's yeet some poor American fan into a television show! That'll be fun, right? New fancy tattoo that pulls me wherever? Yeah, just fucking great. (OCxDoctor)

You know, I was hoping for a quiet Saturday morning walk, maybe go and draw in the park? Then Jack-A-Boy decides to come along and change everything! Now I’m stuck in a universe not my own with a man who knows more than he will say, and a clock counting up. The last thing I expected was to be called non-human...guess anything can happen now. (3-13 Doctor/OC)

Oren Jayce simply wanted a night out. Go to a party, meet some people..relax. Instead he wound up meeting a strange red headed woman calling herself The Doctor and being chased by a shapeshifting alien assassin into a strange tall blue box. The inside of which he was totally not expecting..

Karianne Conner was nothing special. She lived at home, went to university and loved Doctor Who. So what happened when one evening the Doctor appeared, along with a strange light? Was her reality really just a dream? Now, her whole life will change. OC along with 9/10/11/12/13

Florm Rox Fey Fenerill-Slam Slitheen had lost her hunt with Sarah Jane Smith. But luckily, just before the lights went out, the Slitheen was able to find someone else that they could use as bait. This is their story.

All that Time Lord knowledge was stuck in Donna's head, and only the Time Lords could help the Doctor fix her. Of course, they're really going to hate the idea. They also hate him. And humans. They're really, really going to hate that he's married to one. Talk about a tricky home visit. Oh, and to top all: he also has to bring Jack along. (Eleven/Rose, part 9 of "Consequences")

The Doctor finishes his sentence in School Reunion.

Klary Cedrics was an introverted young woman visiting the UK for the first time. On a visit to the Doctor Who Experience in Cardiff, she ends up transported to the Whoniverse, set to jump through the Doctor's timeline. She must overcome her fears and learn to trust as she travels throughout the universe and even experience romance along the way. (9-15/ maybe some Old Who)

What if the doctor was able to rescue Amy from Demons run, what if he was able to find Melody as a baby. What if he was able to snatch her from Madam Kovarian? What if River was rescued by her parents. How would River turn out? How would her bond with the doctor change? River/Eleven, Rory/Amy, Parents Amy/Rory, fluff, feels, fix it, Minor Jack Harkness, Minor Martha Jones

The story of Vastra, Jenny and their growing family through the twentieth century as they face new and old enemies, friends, and everything in between. A few characters are owned by BBC or History books. [[ A work in progress ]] Please Follow as I am updating the story as soon as I have time.

Based on What If Doctor Who Wasn't Axed by DaDoctorWhoFan. After the events at Gabriel Chase, Ace continues her travels with the Doctor, but unbeknownst to her, the Doctor has a secret plan for her that may change her life forever. The Seventh Doctor will also face his own destiny as he goes down a path that will lead him to a cat burglar and his final battle. Cover art by DDWF

What happens when the TARDIS has to intervene to save the doctor and their future? Who will the TARDIS bring in? What will the TARDIS do? While in prison the Doctor has too much time to think, who are they? What are they? Are they even still the Doctor? The Doctor may not know who they are anymore but they have had many friends through space and time that are willing to help.

Phoenix has been left on Earth and the Doctor has just regenerated into a completely new man. Nothing is as it seems and the one who has been hunting Phoenix is only drawing nearer. How will the two aliens react to the many changes within themselves and each other? Who is behind the attacks on Phoenix and who killed her mother? Find out here.

Secrets, memories, and passion abound as Martha Jones asks herself, what are the consequences when someone knows too much about the Doctor? Whether it's herself or, say, an arrogant conspiracy blogger, there is always fallout. And the two of them find that EVERY MOMENT of their relationship is relevant in the race to do damage-control, and save a (relatively) innocent life.

Le Maître et le Docteur. L'un espère sauver l'autre et l'autre espère être à la hauteur. Elle veut changer pour le Docteur, son seul et plus cher ami… et pour le cadeau qu'il vient de lui faire. SE BASE SUR L'IDÉE SELON LAQUELLE MISSY NE MEURT PAS ET EST ENCEINTE (10x12).

While Rose is hopping through dimensions and unfortunately lands on the SS Madame de Pompadour.

This is the story of how Rose Tyler, The Bad Wolf became the widow, how she grew to hate the Doctor for what he had done to her and how she destroyed the universe. Split into three volumes‘, The Widow, The Bad Wolf, And Rose. The Bad Wolf is coming out on the 5th of August and I honestly can’t recommend that you read The Widow, just skip it The Bad Wolf

Alyssa has always been a fan of Doctor Who. One day she is teleported to the Doctor Who universe where she constantly jumps through time. Mainly to adventured The Doctor goes on but also those who are connected to him. (I'm not really good at writing summaries but this best explains my story)

The Doctor and Bill are summoned by UNIT to investigate a strange discovery in Egypt. What they find beneath the sands could mean the end of the world.

When I was younger, I always dreamed of being able to just go out there and see the world. And despite my initial panic about having died and been reborn as an abandoned injured pet, I felt almost excited. Then, I met the Doctor. "You're just a small fella aren't you? Just small and scared and alone. I know how that feels."

(Synopsis: A Slitheen Family of thieving criminals crashland on Earth. Faced with an uncertain environment and hostile natives, this Family hatches a cunning plan to enrich themselves: stealing all the alien technological assets that UNIT possesses before they repair their ship and head back out into space once more…) (N.B. This is a Slitheen story with mature and adult themes.)

Rose Tyler's life is a grand series of adventures, but her friends and family are often left behind. yet they see and know things that even Rose or the Doctor do not. This story will hold the introspections and missing scenes of the Guardians of the Universe Series.

SEQUEL to The Odd Life of Nova Sue series. Sydney Marie Elise wakes up from a strange dream she had of another life that seems all too real to be a simple dream. A life as the daughter of an all-powerful Time Lord known as the Doctor. *** Summary might change at the story progresses ***

Many years after his adventures in Time and Space with the Detective Boys, the Doctor lands in a forest on the Tatras Mountains, Poland, 1932. There he meets Mariah, Karin, Gregor and Anatoly, a group of 4 friends emigrating from Ukraine, in a cabin owned by a mysterious man who's hosting them. Things soon will degenerate when the food supplies ran out and a storm flood the cabin.