Unspeakable Conspiracy
The Silencers
By: Tellemicus Sundance
Bourne Legacy x Harry Potter
After World War II, the Ministry desires a means of preventing the rise of another Dark Lord with secret, well-trained, Ministry-loyal 'super Aurors' to fight such wizards. On the night before their appointment, the next Minister commissioned the Unspeakables to create a new breed of super fighters by any means necessary. Under the new sub-division codenamed 'the Silencers', the Unspeakables began numerous secret projects scattered throughout the UK. They tried brainwashing, heightened physical (SAS) and magical training, child-soldiers, and various others. But the ones that held the most potential and promise were the advanced potions/elixirs for augmented mental, physical, and magical prowess(1) and transplanting organs from magical beasts(2).
Over the years, a number of Muggleborn orphans go missing shortly after their discovery (3-7 per year for 30 years). Though disturbing, none of the wizards really care enough to look into it or are too busy to do so (Dumbledore). These children served as the test subjects of the many experimental programs that had been put in place. The research went into overdrive during Voldemort's rise to power. The researchers and Silencer division head caught strictly to themselves, constantly evaluating their employees to determine if there were any security leaks or turncoats. Despite numerous Death Eater infiltrators in the Unspeakable Department as a whole, no one but the actual employees even knew of the Silencer Programs existence. And it was mostly the Silencer operatives who were field-tested and able-bodied that fought against Voldemort. They were able to gather some critical intelligence and helped set up some of the Light Side's more significant (and fleeting) victories against the Death Eaters. But it was James and Lily Potter's entanglements in the war and their successes that drew the researchers' attentions. They grew determined to acquire a 'specimen' from them to use in their Programs since any child from them would likely be quite skilled and powerful.
Five years after the war ended with Voldemort's unexpected disappearance, Mundungus Fletcher accidentally stumbled upon one of the programs. He bargained valuable information for his life and silence. He revealed that he knew where Dumbledore had hidden Harry Potter and he knew how to breach the blood wards and protections. The researchers were overjoyed at the possibility of using the famed Boy-Who-Lived as one of their projects. They launched a discreet attack on the Dursleys home, penetrating the wards, altering the family's memories, and stealing Harry Potter away. They put him into their entry-level programs.
The Wizarding World went into an uproar when it was discovered that Harry was not enrolled in Hogwarts six years later. Dumbledore had the Order working tirelessly to find Harry and the Prophet badgered the Ministry endlessly. Rita Skeeter was convinced there was a conspiracy happening in various departments of the Ministry and that Potter was somehow involved. To ensure his silence, the Unspeakables had Fletcher discreetly assassinated during a bar fight in the Hog's Head.
Harry graduates from his basic training, completing most of his enhancements, and starts taking missions in the defense of the realm when he turns 15. However, he was not a mindless slave bound to the Ministry's will. He resented being taken from his home (despite however much he had hated it), not being allowed to have a childhood and attend Hogwarts, and being shaped into a merciless weapon. Thus, in order to keep a control over the boy, the researchers kept him dependent on their enhancement elixirs. Even though he'd already reached a stable state for both physical and magical enhancement prowess, his mental enhancement had not been stabilized. The mental enhancement allowed him to think and react faster, suppress pain quicker and easier, and utilize his magic without the need of a focus (wand, ring, bracelet, etc.).
When Harry was fully deployed, it was to fight the reincarnated Voldemort and the rising Death Eaters. He raided multiple known Death Eater homes, stealing intel and planting evidence for the Aurors to find. But when he was unexpected caught in an Auror trap, the Silencers declared him a security risk and tried to eliminate him before he could tell the world about them. With help from Auror Nymphadora Tonks, he escaped the initial attack (which also killed many Aurors and was conveniently blamed on him) and went into hiding. This action sealed the fate of the current staff and operatives of the Silencers. The higher-ups took the acquired research and sealed it away, and proceeded to execute everyone attached to the Program to cover their tracks in the event that Harry tried to reveal them.
Instead, Harry grew determined to stabilize his condition so that he wouldn't decay and degrade to a worthless Squib (the fate of those who were continually enhanced after the first couple treatments). Tonks accompanied him, unwilling to let the Boy-Who-Lived just vanish once again from the world. With her help, he was able to infiltrate one of the researchers' labs and steal a copy of the elixir data. Using that data, he brewed up the mental elixir and administered it to himself, gaining permanent stability to his mental enhancements.
Once he recovered, Tonks was able to talk him into helping her fight Voldemort, reminding him that his parents had tried to stop him to keep Harry safe from the Dark Lord and his minions, and that the least he could do in their memory was to once and for all kill Voldemort. With nothing else to do and with the whole of the British Magical World out to get him since he was officially a criminal, Harry decided that he couldn't possibly make his situation any worse than it already was. He decided to follow a 'no code of conduct' approach in his means of finding and killing Voldemort.