Larrin arrives on Atlantis requesting help to get her people back. Can Sheppard trust her or does she have an ulterior motive? Sheppard centric with Larrin, McKay and team. Complete.

Rodney has time to think

Sheppard’s away team is trapped in an ancient lab and they’re not alone. Can they get out before the darkness consumes them. H/C

Takes place after Critical Mass (Episode: 2.13) How would Caldwell have been if he'd had a daughter and she'd figured out the code?

There's interesting flora on some of the worlds in Pegasus.

When the team detects a Runner's signal broadcasting from Sateda, they go to investigate. There they encounter a ferocious 16-year-old girl who knows everything about Atlantis and just so happens to have Ronon's eyes. Problem is...they've never met her before. This chance meeting will alter Ronon's life forever and change the way he looks at a woman he already knows. [Ronon, OC]

The Atlantis expedition created a drug to transform their enemies into humans, but in order to use it, they need a wraith. (Season 2: Michael)

He is the embodiment of her fears, and his presence fills her sleep with nightmares. Some fears are constant, some you must face, and some you can choose to let go.(Season 2: Michael, but inspired by the audio commentary.)

A thin, cool mist hovered in the air surrounding the City of the Ancestors. "Is this what Afghanistan felt like? Back home." She kicked herself; she wasn't sure what "home" meant anymore. Angst and hope wrapped up in one drabble, possibly ship-adjacent.

His people suffered from some sort of disease, or at least, that was what he'd been told. He didn't question it, because he had faith in those around him. People were here to help them. They were here to get better. Weren't they? (Season 3: Misbegotten)

A mission to find another stargate for Rodney's 'gate bridge project seems to be just what the team needs to help everyone recover after John's encounter with Kolya and the Wraith. However, the seemingly simple trip to investigate an abandoned planet quickly runs into trouble, and John isn't as all right as he thinks he is. Post-episode S03E07 Common Ground (Pt 2 of Team Sheppard)

McKay reflects on his favourite dessert.

John and the team are on a peaceful mission when they are attacked by hideous monsters. The beasts are unlike anything they have ever seen before and before long the creatures' sinister origins are revealed. But not before John finds himself in trouble.

Aria Victus had lived her entire life away from any humans. Her only company were the Wraith. Abandoned by her parents on a strange planet, she had survived the wraiths, the cold and her loneliness. One day, three strangers, humans like her, arrived on her planet. They wanted something she possessed and they had something she desired. John Sheppard/OC (slowburn) [Start Season 2]

They're more than just best friends, they're brothers...what if John and Rodney were brothers by adoption. McWeir, Sheyla: Final Chapter is up! What McWeir, Sheyla, Badman

an explanation for Rodneys daily behavior throughout the show in terms of crankiness and agitation, the reason is darker than you think

Continuation of 'Star Man' ... It's now time to leave Earth in Atlantis. Will it all go smoothly? Will they make it back to Pegasus? Will John need a push! Read and see!...plenty of whump, angst, adventure, mystery...and more!

The team visits a planet, following a beacon. A bridge collapses, Rodney is hurt, and the pirates start flooding in. This is a sequel to "Warm and Safe and Dry" and "Among the Stars". They should probably be read first

ALLIANCE FIC – 2 weeks after the events of 'Interlude 4' and Atlantis continues to search for Janus' secret lab; Teyla, still feeling slightly unwell, is aboard the Sythus on its way to hunt down the elusive Skerti out beyond the Alliance border. And in the Training Facility, Oneakka continues his recovery while struggling with new developments regarding Seeal.

Crossover with Bones, Stargate Universe, Stargate Sg1. Continues from The intern and the Wraith. The Pegasus Fleet made their presents known as they established a new base of operation in the Pegasus Galaxy. President Henry Hayes retires and appoints General John Sheppard as the new President of the Tau'ri Federation.

The team visits another Ancient ruin. Teyla and Ronon are badly injured and McKay must be left behind.

Keller finds herself in a sticky situation. Thankfully Sheppard is there to save the day, even though he needs some rescuing himself. This touches on some heavy subject matters. NO SHIPS and please read the content warning.

The Ancients created a lot of amazing technology. They also made some... questionable devices. A series of one-shots featuring times the Atlantis crew had some more humorous encounters with Ancient technology. Involves pretty much all the characters at some point.

Atlantis has arrived on Earth. Everyone, including John Sheppard and his Team, have been ordered to leave. John watches them go through the 'gate until it is just Richard Woolsey and himself left. What is their fate? Where is Todd? What on Earth is going to happen to them all now? NOW COMPLETE

Quick one-shot tag to 5x01 Search and Rescue from Keller's POV. Addresses a moment in the episode between her and Sheppard that I always found interesting. No ships, just a moment between the two while he's recovering from surgery.